Gene RPC_0217 details

Gene Information

• Locus tag: RPC_0217
• ID: 3971166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 235580
• End bp: 236293
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637923330
• Product: hypothetical protein
• Protein accession: YP_530111
• Protein GI: 90421741
• COG category: [S] Function unknown
• COG ID: [COG2968] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.330993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00697303
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACAGCC TCGACTGCCG CAAGGCTCTG ATCGGGCTGA CCGCCCTCGC CGCGCTGACC 
GTCCCCGCGT TGGCGGATAG CATTCCGCCG CCGGCGGTTT CCGTGACCGG CGAAGCCAGC 
GTGTCGGTGC CGCCGGATCT GGCGAGCGTC GATGGCGGCG TCACCACCGA GGCCAAGACC 
GCGCGCGAGG CGTCTGACGC CAACAACGTC GCGATGGGCA AGGTGTTGCT GGCGTTGAAG 
GGCGCCGGCC TCGAGGACAA GGACCTGCAG ACCTCGCGGC TGTCGCTACA GCCGCAATAT 
GCCAACCAGA ACCGGCCGGG CCCCAACGTC GTGGTCGGCT ATCGCGCCAC CAACCGGATC 
ACCATCCGGC TGCGCGACGT CAGCAAGGTC GCCAGTGTGA TCGATACGCT GGTGTCATCC 
GGCGCCAACG AGGTCGGCGG CATCGATTTC GCGGTCGCCG CCGCCTCCAA GCTGCTCGAC 
GAGGCGCGCG ACCAGGCGTT CGCCGACGCC CGCCGCAAGG CGGAGATCTA CGCGCGCGCC 
GCCGGCGTCG CGCTCGGCGC ACCGCTCAGC ATTTCCGAAG ACAGCGCGCC CGGCCCGATG 
CCGATGCGCA AGATGATGTT GGACCGCGCC GCCTCCGCCC CGGTGGCGCC GGGCGAAGAG 
ACGCTGCGGG TCTCGGTCAG CGTGTCGTTC GCGATCAAGC CGGCGACGCC GTAG 

 

Protein sequence

MNSLDCRKAL IGLTALAALT VPALADSIPP PAVSVTGEAS VSVPPDLASV DGGVTTEAKT 
AREASDANNV AMGKVLLALK GAGLEDKDLQ TSRLSLQPQY ANQNRPGPNV VVGYRATNRI 
TIRLRDVSKV ASVIDTLVSS GANEVGGIDF AVAAASKLLD EARDQAFADA RRKAEIYARA 
AGVALGAPLS ISEDSAPGPM PMRKMMLDRA ASAPVAPGEE TLRVSVSVSF AIKPATP