Gene RPC_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0165 
Symbol 
ID3971270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp179900 
End bp181246 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID637923278 
Productpeptidase M23B 
Protein accessionYP_530059 
Protein GI90421689 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC CGCGGCCCCA CCCGACACTG GGTCACACGG CGGCTTTGGC CCGTCCGGGG 
GCGGCTGTGC TGTTGGCGGG CGTGATCGCG GCGGCCGCGA TGTTATCGCA AGTGCAGGCG
CAAAGCGCGC CGCCGCCGGT CGATCTCATC AAGCAGCGCG AGCAGGAACT CGAGGCGGCG
CGCGCCCAGC AAAAGAGCGC CGCGGAATTG CGCGAGAAGC TCAAGGCCGA TATCGCCGCG
ATCGGCGAGG ATCGTACCAA GCTCAACGAA CGACTGATCG ACATCGCCGC AAGGGTGCGC
GGCATCGAGA CCAGCATCGG CGACGCCGAG GCGCGGCTGC GGCCGCTCGA CGTCCGCGAG
CAGCAGATCC GCTCTTCGCT GGAAGAGCGC CGCGCCGAGA TCGGCGAAGT GCTGGCGGCG
TTGCAGCGCG CCGGGCGCCG CGCGCCGCCG GCGTTGTTGG TGCGGCCGGA AGACGCGCTG
CAATCGCTGC GCTCGGCGAT GCTGCTCGGC GCCGTGGTGC CGGAGATGCG GGTGCGCGCC
GATCGACTGG CCAGCGACCT CGGCGAACTG ATCAACTTGC GCAAGACCAT CGCCGCCGAA
CGCGATCAGC TGGCGGCCGA TCGCGCCAAG CTGACCGAGG ATCAGTTGCG GCTGGCCTCA
TTGGTCGAAG AGCGGCAGAA GAAACAGAGC GCCGCCGAAA AGGACATGGA GGCGGAACGC
GCCCGCGCCG CGACGCTGTC GCGGCAGGTC GACAGTCTGC AGGACCTGAT CGCCAAGATG
GAGCAGGACC TGAAGAGCGC GGCGAAGGCC GCCGCCACCG CCAATCTGCA GGGCGCGCCG
ACCGCAGCGA ACGGCAAGCC GAATATGGCG GCGCTGCGCG ATCCCGGCCG GCTCAGCCCG
GCGATTTCGT TCGCCTCCGC CAAGGGACTT TTTGCGCTTC CGGTGAACGG CAGCAAGATC
CGCGAATTCG GGCGTTCCGA CGGCGTCGGC GGCACCGAGA AGGGTATTTC GGTGGCAACG
CGGCCCGGCG CCCAGGTCAC AACTCCGTGC GATGGCTGGG TTGTGTATTC AGGACCGTTT
CGCAGCTACG GACAACTCTT GATCCTGAAT GCCGGTGGCG GGTATCATGT GTTGATCGCC
GGGATGGAGC GCATTTCGGT TAACATCGGA CAATTCGTGC TCACGGGAGA GCCTGTCGCG
ACCATGGGAT CGAGCTCCCG GGTCGCTTCC ATCCTCGCGG CCAATGCGAG TCAGCCCGTG
CTCTATATCG AGTTCCGTAA GGACGGCACT CCCATCGATT CAGGCCCATG GTGGGCCGCA
AGTGAAGGCG AAAAGGTTCG CGGATGA
 
Protein sequence
MQTPRPHPTL GHTAALARPG AAVLLAGVIA AAAMLSQVQA QSAPPPVDLI KQREQELEAA 
RAQQKSAAEL REKLKADIAA IGEDRTKLNE RLIDIAARVR GIETSIGDAE ARLRPLDVRE
QQIRSSLEER RAEIGEVLAA LQRAGRRAPP ALLVRPEDAL QSLRSAMLLG AVVPEMRVRA
DRLASDLGEL INLRKTIAAE RDQLAADRAK LTEDQLRLAS LVEERQKKQS AAEKDMEAER
ARAATLSRQV DSLQDLIAKM EQDLKSAAKA AATANLQGAP TAANGKPNMA ALRDPGRLSP
AISFASAKGL FALPVNGSKI REFGRSDGVG GTEKGISVAT RPGAQVTTPC DGWVVYSGPF
RSYGQLLILN AGGGYHVLIA GMERISVNIG QFVLTGEPVA TMGSSSRVAS ILAANASQPV
LYIEFRKDGT PIDSGPWWAA SEGEKVRG