| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0143 |
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| Symbol | |
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| ID | 3971285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 159143 |
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| End bp | 159790 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637923255 |
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| Product | Ham1-like protein |
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| Protein accession | YP_530037 |
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| Protein GI | 90421667 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCG GACCGATTAA GATCGTTTAC TGCTCGTGGA GCTCCTTCAA GAAGGAAGAG
TGGGCTATCG CCAAAGACCA AATTGCACTT CCAAGCGCAG GAAAACCGCT TGGCCATTTG
TTTGATTGTC AATTTCGAGA TGTCCACACC ACCGAGCCGC TGTTGTGCGA TTTGGAAGCG
ATGGTCCGTT TCAAAATCGC TTCCGCGTAT CGAGCCGTGC AGGTCCCGTG CATCGTGGAG
CACGCCGGAC TTATTCTTGA AGGGTACGAG GACAAATCTT ATCCGGGCGG CTTAACCCAA
CCGATGTGGG ATTCACTCGG AGCCGAAAAG CTCGTTGCAA GTTGCTCGAC GCTTTCTACG
AAAGCAATTG CGCGAGCCGT CGTCGGATAT TGCGACGGGC TTAACACCTA CACCTTTGTC
GGGGAAACTA AGGGCACGTT GTCCGCAACA CCGCGCGGAG ATCGGGACTT CTATTGGGAT
ACGGTATTTT GTCCGGATGG CTTCGGCGGC AAGACGTACG CGGAAATCGT CGGCTCGGAT
CGAAAGGGCT TGATCGAAAA GTTGAAAGTA TCTCAGTCCA TTCGCGCGCT CCAAAAATTC
ATGGAGCACC GACTTAAGAA CGAACCTTCA CTCTTCCCGG CTCTATGA
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| Protein sequence | MATGPIKIVY CSWSSFKKEE WAIAKDQIAL PSAGKPLGHL FDCQFRDVHT TEPLLCDLEA
MVRFKIASAY RAVQVPCIVE HAGLILEGYE DKSYPGGLTQ PMWDSLGAEK LVASCSTLST
KAIARAVVGY CDGLNTYTFV GETKGTLSAT PRGDRDFYWD TVFCPDGFGG KTYAEIVGSD
RKGLIEKLKV SQSIRALQKF MEHRLKNEPS LFPAL
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