| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0133 |
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| Symbol | |
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| ID | 3971275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 146762 |
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| End bp | 147457 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637923245 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_530027 |
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| Protein GI | 90421657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGATTA AAGCCTCCCC GGCCTCGCCA AGCCATCGGC CAGACGCGGT TTTGTTCGAC
ATTGGCATGA CAATCATCTT TCCCGATGGT CGCGTCTTAG CTCGGGAGTT CAATAGACTT
TCGCAAGGAT GGATTGTTAA TCCACGCGAT GCGGCACGTG CCTTAGCTGC GTCGGCTGAG
ATGCATCACT TCGGCTTCTC GGATTCTGTT GAAGCCGTGG GCGCGGCGAT GGCCACGCAC
CTCAACGTCC ATCGCGACCT GGGCGTGGCT GCCTGGCGGG CTGCGATTGA CGCCGGGGAT
CTGTATTCGG AGATAGATCC GTTCTCAAAG ATTGTCCTAC AAGAGTTGAG GCGGAAAGGG
ATCAAAACAG CGGCCGTGTC GAATGCGTCG AACGACTTGA AAGAGGAATT GGCCTCTTAC
GATTTGCTTT GCCTCTTCGA TGTAGCGATC GGATCCAATG ACGGATACGC AGAAAAGCCA
CATCGGGCCA TGTTCGATGC CGCGGTGGAT GCGATTGGAG TGGATCCCGC AAGTGCTTGG
CATGTCGGAG ACGGTCTCAT CAATGACGTT CTAGGCTCGG CGCGAGCGGG AATTGGGCAT
CAAATTCTTG TGGACCGATA TGGTGTTTAT ACCGCGCCGC CCTGCGAAGT TGTCGAGTCG
ATGGAAGCTC TCAACTGCAT GATCGCGCAA CTATGA
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| Protein sequence | MRIKASPASP SHRPDAVLFD IGMTIIFPDG RVLAREFNRL SQGWIVNPRD AARALAASAE
MHHFGFSDSV EAVGAAMATH LNVHRDLGVA AWRAAIDAGD LYSEIDPFSK IVLQELRRKG
IKTAAVSNAS NDLKEELASY DLLCLFDVAI GSNDGYAEKP HRAMFDAAVD AIGVDPASAW
HVGDGLINDV LGSARAGIGH QILVDRYGVY TAPPCEVVES MEALNCMIAQ L
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