Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0118 |
Symbol | |
ID | 3971299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 133128 |
End bp | 133949 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923234 |
Product | IclR family transcriptional regulator |
Protein accession | YP_530016 |
Protein GI | 90421646 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC AAGGATCCGG CGGCGTCCAC TCGGTGCAGC TTGCGATCGA CGTGCTGGAA GCCGTCGCCT TCGCCGACGA GGAGCTCGGC GTGACGCAGA TCGCCGAGCG ACTGAGCATG ACCAAGGGCT CGGTGTTCCG GCATCTGCAG ACCTTCGTCG ACCGCGGTTA CCTGACGCAG AACCCGACGA CGTCGCGCTA CGCGATCGGG CCGAAGAGCC GGCTGTTGGC GCGGCACGCG CCCGAGGCCG ACCTGGTGCA TCTTGCCGAG GGGCCGATGC GGCAGTTGCG CGACGCGCTC GGCCATCCGG TGGTGCTGTC GGAGATGACG CCGCGCGGCG CGCTGGTGCT ACACACCCTC TCCGGCACCG CGCCGATCGA GATCGGGGTG CGCTCCGGCA GCGAACTCAC CTTCCACGCC TCGGCGCAGG GCAAGGTGAT GCTGGCCTTC GCGCCGGCGC CGTTCCAGGC CAGGGTGCTG GCGCGGCCGC TGCAGCGCTA CACCGACAAG ACCATGATCA CGACGCGTCG GCTGGAGAAG GAACTGGTGA AAATCACCAG CCTTGGGTTT GCCTCAGCGC CGGAAGAGAA CATGCTGGGG CTCAACGCAG TGGCCGCGCC GATCTTCGAT GCCCACGATG CCTGCATCGC GGCGGTCGCG CTGGTCGGTT CGATCCAATT TCTGCCGGAA AAGCCCCGCC CCTCCGACGT CACCCAACTG ATCGAAACCG CACGGCAAAT CTCCCGCAAG CTCGGCCACG GCAACCGCAG CGGCGAGCCG CCCACCGCGG CGAAGCGGCG GCCTCGGACG GCCGGGGTTT AA
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Protein sequence | MSEQGSGGVH SVQLAIDVLE AVAFADEELG VTQIAERLSM TKGSVFRHLQ TFVDRGYLTQ NPTTSRYAIG PKSRLLARHA PEADLVHLAE GPMRQLRDAL GHPVVLSEMT PRGALVLHTL SGTAPIEIGV RSGSELTFHA SAQGKVMLAF APAPFQARVL ARPLQRYTDK TMITTRRLEK ELVKITSLGF ASAPEENMLG LNAVAAPIFD AHDACIAAVA LVGSIQFLPE KPRPSDVTQL IETARQISRK LGHGNRSGEP PTAAKRRPRT AGV
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