Gene RPC_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0118 
Symbol 
ID3971299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp133128 
End bp133949 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID637923234 
ProductIclR family transcriptional regulator 
Protein accessionYP_530016 
Protein GI90421646 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AAGGATCCGG CGGCGTCCAC TCGGTGCAGC TTGCGATCGA CGTGCTGGAA 
GCCGTCGCCT TCGCCGACGA GGAGCTCGGC GTGACGCAGA TCGCCGAGCG ACTGAGCATG
ACCAAGGGCT CGGTGTTCCG GCATCTGCAG ACCTTCGTCG ACCGCGGTTA CCTGACGCAG
AACCCGACGA CGTCGCGCTA CGCGATCGGG CCGAAGAGCC GGCTGTTGGC GCGGCACGCG
CCCGAGGCCG ACCTGGTGCA TCTTGCCGAG GGGCCGATGC GGCAGTTGCG CGACGCGCTC
GGCCATCCGG TGGTGCTGTC GGAGATGACG CCGCGCGGCG CGCTGGTGCT ACACACCCTC
TCCGGCACCG CGCCGATCGA GATCGGGGTG CGCTCCGGCA GCGAACTCAC CTTCCACGCC
TCGGCGCAGG GCAAGGTGAT GCTGGCCTTC GCGCCGGCGC CGTTCCAGGC CAGGGTGCTG
GCGCGGCCGC TGCAGCGCTA CACCGACAAG ACCATGATCA CGACGCGTCG GCTGGAGAAG
GAACTGGTGA AAATCACCAG CCTTGGGTTT GCCTCAGCGC CGGAAGAGAA CATGCTGGGG
CTCAACGCAG TGGCCGCGCC GATCTTCGAT GCCCACGATG CCTGCATCGC GGCGGTCGCG
CTGGTCGGTT CGATCCAATT TCTGCCGGAA AAGCCCCGCC CCTCCGACGT CACCCAACTG
ATCGAAACCG CACGGCAAAT CTCCCGCAAG CTCGGCCACG GCAACCGCAG CGGCGAGCCG
CCCACCGCGG CGAAGCGGCG GCCTCGGACG GCCGGGGTTT AA
 
Protein sequence
MSEQGSGGVH SVQLAIDVLE AVAFADEELG VTQIAERLSM TKGSVFRHLQ TFVDRGYLTQ 
NPTTSRYAIG PKSRLLARHA PEADLVHLAE GPMRQLRDAL GHPVVLSEMT PRGALVLHTL
SGTAPIEIGV RSGSELTFHA SAQGKVMLAF APAPFQARVL ARPLQRYTDK TMITTRRLEK
ELVKITSLGF ASAPEENMLG LNAVAAPIFD AHDACIAAVA LVGSIQFLPE KPRPSDVTQL
IETARQISRK LGHGNRSGEP PTAAKRRPRT AGV