| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0114 |
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| Symbol | |
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| ID | 3971295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 128947 |
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| End bp | 130098 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923230 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_530012 |
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| Protein GI | 90421642 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGC ATAAGGCGCT CGTTGTCGCC ATCATGCTGG CGGCGACACC GATACTCGCG
GCCGCCGCGC AGGAGACGAT CAAGATCGGT TCCTCGCTCG GGCTGACCGG CTACGGCTCG
GCGACCGACG CGCACTGGCG CGACGGCATG CAGATCGCCA TCGAGCAGGT CAACGCGCAA
GGCGGCGTGC TCGGCAAGCA GCTGGAGCTG GTGTTCGAAG ACAACAAGTC GACGCCGCAG
CAGGCGGTGG TCGGCTATCG CAAGATGATC ACCGACGACA AGGTGGTCGC CTTCGCCAGC
GGCTGCATCT CCGCCGGCAA CTTCGCCGCC GCCAGCTTCG TCGCCAAGGC CAAGCTGCCG
ATGTTCCTGT GCTCGATCCT GCCGCGCCAG CCGGCGGAGC AGAAATGGGC GTTCCAATTC
CTGCCGCCGC CGAAGTTCGA GGTCGATGCG CGCTACCAGT ATCTGAAGGA AAAGACCGAC
ATCCGCAAAG TCGGGATTCT GTCGGACCCG AGCCCCTACA GCCTGTTGAT GCGCGATCTC
GCGGTCAAGG GCGCCGAGGA ATTCGGCCTC ACCGTGGTGG CCAACGAATC CTATCAGCAG
GACGACGCCG ATTTCAGCGT GCAGATCGGC CGCGTCAACG CGGCGGGCGC CGGCGCGCTG
ATCATGCTCG GCCAGGGCAA CGCGGTGGTG ACCGTGGCCA ACAACATCCG CAGCCTCGGC
CTCACCAAGC TGTTGATGCT GGGCAGCGTC AACGAACTCG ACATCCTGCT GGCGACCGGC
AAGGTGTTGA ACGAGCAATA TCTGTTCCCC TCGCCGCTGA TCCAGGTGGC CTCCGACGAC
ATCAGCGTGA TCAGCGACCC GGCGGCGCGG CAGGCCGCCG AACCGTTCGT CAAGGCGATG
AAGGCCAAGT ATGGCCGGAC CGACAACGCG CAGGCGTCGC GGGGCTGGGA TTCCATCCTG
ATGATGGCCG CGGCGATGAC CAAGGCCAAG AGTGTCGATG GCACCGCGGT GCGCGACGCG
ATGGAGCAAC TCGGGCATTT CGTCGGCGCC GGCGCGTCCT ACGAGTTCAC CGCCGACAAC
CACATCGGCA TCTCCCACAA CCCTTACGTG ATCGCCCAGG TGAAGGACGG CGCCCTGGTT
CTAAAGAAAT GA
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| Protein sequence | MGSHKALVVA IMLAATPILA AAAQETIKIG SSLGLTGYGS ATDAHWRDGM QIAIEQVNAQ
GGVLGKQLEL VFEDNKSTPQ QAVVGYRKMI TDDKVVAFAS GCISAGNFAA ASFVAKAKLP
MFLCSILPRQ PAEQKWAFQF LPPPKFEVDA RYQYLKEKTD IRKVGILSDP SPYSLLMRDL
AVKGAEEFGL TVVANESYQQ DDADFSVQIG RVNAAGAGAL IMLGQGNAVV TVANNIRSLG
LTKLLMLGSV NELDILLATG KVLNEQYLFP SPLIQVASDD ISVISDPAAR QAAEPFVKAM
KAKYGRTDNA QASRGWDSIL MMAAAMTKAK SVDGTAVRDA MEQLGHFVGA GASYEFTADN
HIGISHNPYV IAQVKDGALV LKK
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