| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0104 |
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| Symbol | |
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| ID | 3971324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 118134 |
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| End bp | 119609 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923220 |
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| Product | succinate-semialdehyde dehydrogenase (NAD(P)+) |
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| Protein accession | YP_530002 |
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| Protein GI | 90421632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.108131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCG TCACCCCCAT CGCATCGCGC ACCGTCGATG TCAGCACGAT CCCCACCGAT
TTGTTCATCG CCGGCGCATG GCGGGCGTCG GCGTCGGGGC AGCGCATCGA GGTGATCAAT
CCGTCCACCG AAGAGCTGCT CGCCACGATC GCCGACGCCA GCGTCGAGGA TGGCCTCGCC
GCGGTCGATG CCGCGGCGGC GGCGGCGCGG GGATGGGCCG CGACCGCGCC GCGGCAGCGC
GCGCAAATCC TGCTGCGGGC GTTCGAGCTG ATGATCGAGA AGGCCGATTG GTTGGCCGAG
CTGATTTCGC TGGAAAACGG CAAAGCGCTG GCGGATGCGA TGGGCGAGGT CAAATACGCC
GCCGAGTTTT TCCGCTGGTA CGCCGAGGAA GCGGTGCGCA TCCAGGGCGA CATCTCGATG
GCGCCGGGCG GCGGCAATCG CATCCTGGTG CAGTATCAGC CGGTCGGGGT GTCGGTGCTG
GTGACGCCGT GGAATTTTCC CGCCGCGATG GCGACCCGCA AGATCGCTCC GGCGCTGGCG
GCCGGCTGCA GCTGCATCTT GAAGCCGGCG AGCGAAACCC CGCTGACCGC CTTCGCGCTG
GTGGAGATAC TTTGCGCCGC CGGCGTGCCC GCCGGCGTCG TCAACGTCGT CACCACCTCG
CAGCCGGGCC CGCTGATCAG CGCGATGCTG CACGATTCCA GGGTGCGCAA ACTGTCGTTC
ACCGGATCCA CCGCGGTCGG CCGGCTGCTG CTGCGCGAGG CCTCGGATTG CGTGATCAAT
TGCTCGATGG AATTGGGCGG CAACGCGCCG TTCCTGGTGT TCGACGACGC CGATCTCGAT
GCCGCGGTCG ACGGCGCGAT GATTGCCAAG ATGCGCAACG GCGGCGAGGC CTGCACCGCG
GCGAACCGCT TCTACATCCA GCGCGGCATC TTCCATGCCT TCGCGCATAA GCTCGCGGCG
AAGATGGCCG CGATGCAGCT CGGTGACGGA TGGCTCGCTT CCACCGCGTG CGGTCCGCTG
GTCAATGAAA AGAGCCGCGA CAAGGTCGCC GCCTTCGTCG ACGATGCTAT GGCCCGCGGC
GCCAAGGCGC TGACCGGGGG CAAGCCGCTC GACCGCAAGG GCTACTTCTA TGAGCCGACG
GTGCTGATCG ATGTGGCGCC GGACAGCAAG CTGTTGCACG ACGAGATTTT TGGGCCGGTG
GCGGCGCTGG TTCCGTTCGA CAGTGAGGAC GACGTCATCG AGCTATCGAA TGCGTCCGAA
TACGGCCTGG TCTGCTACGT CTACACCCGG GATCTCGCCA AGGGCTTGCG CGTTTCCGAA
CGGCTCGACA GCGGCATGGT CGCGCTCAAT CGCGGGCTGG TGTCCGATCC AGCGGCGCCG
TTCGGCGGCA CCAAGCAGAG CGGCATCGGC CGCGAAGGCG CGCATCACGG CCTGTTGGAA
TTCACCGAAG CAAAATACAT CGCCACAAAT TGGTGA
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| Protein sequence | MNVVTPIASR TVDVSTIPTD LFIAGAWRAS ASGQRIEVIN PSTEELLATI ADASVEDGLA
AVDAAAAAAR GWAATAPRQR AQILLRAFEL MIEKADWLAE LISLENGKAL ADAMGEVKYA
AEFFRWYAEE AVRIQGDISM APGGGNRILV QYQPVGVSVL VTPWNFPAAM ATRKIAPALA
AGCSCILKPA SETPLTAFAL VEILCAAGVP AGVVNVVTTS QPGPLISAML HDSRVRKLSF
TGSTAVGRLL LREASDCVIN CSMELGGNAP FLVFDDADLD AAVDGAMIAK MRNGGEACTA
ANRFYIQRGI FHAFAHKLAA KMAAMQLGDG WLASTACGPL VNEKSRDKVA AFVDDAMARG
AKALTGGKPL DRKGYFYEPT VLIDVAPDSK LLHDEIFGPV AALVPFDSED DVIELSNASE
YGLVCYVYTR DLAKGLRVSE RLDSGMVALN RGLVSDPAAP FGGTKQSGIG REGAHHGLLE
FTEAKYIATN W
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