Gene RPC_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0010 
Symbol 
ID3969435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp13773 
End bp14273 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637923124 
ProductFixH 
Protein accessionYP_529908 
Protein GI90421538 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC CAGTGACGTC GCCGCGGCCG TTGACCGGAG GTGTCGTTCT TGCGTCGCTG 
CTCGCCTTCT TCGCGGTGGT GCTCGGTGTC AACATGACGA TGATGCTGCT GGCGATCGAG
ACCCTGCCGG GGACCGAGGT CGACAGCGCC TACAGCGCCA GCATCCGCTA TTCCAACGAG
ATCGCCGCGG CGCGCGACCA GGCGCAGCGC GACTGGCGCG TCAACGCCCG CGTCGAACGC
CAGCCGGATG GCTCGGCGTC GCTGCGCGTC GAGGCTCGCG ACCGCAACGG CGCGCCGCTC
GCCGGCCTGA CGTTTTCCGG CCGGTTGGAA CGGCCGGCCG ACAAGCGTGC TGACAAGGAA
GTGATCCTCG CCGAGATCGG CGACGGGGTC TATCGTGGTA ACGCTGTCGG CGTCTCCCCC
GGACAATGGG ACCTGGTGAT CGAGGGCGAC TCCACCGGCA ACAGGATGTT TCTGTCGAAG
AATCGCCTGG TCCTGAACTA G
 
Protein sequence
MSKPVTSPRP LTGGVVLASL LAFFAVVLGV NMTMMLLAIE TLPGTEVDSA YSASIRYSNE 
IAAARDQAQR DWRVNARVER QPDGSASLRV EARDRNGAPL AGLTFSGRLE RPADKRADKE
VILAEIGDGV YRGNAVGVSP GQWDLVIEGD STGNRMFLSK NRLVLN