| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_R0042 |
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| Symbol | |
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| ID | 3968734 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3209807 |
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| End bp | 3212678 |
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| Gene Length | 2872 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640713313 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.121457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGTCAAGTGA TTAAGCGCAC ATGGTGGATG CCTTGGCAGT TAGAGGCGAT GAAAGACGTA
GGAGCCTGCG ATAAGGCTAG GGGAGCTGGC ACACAAGCTT TGATCCTAGC ATTTCTGAAT
GGGGAAACCC ACTGAGCTTG CTCAGTATCG TGCACTGAAT ACATAGGTGT ACGAGGCGAA
CCCGGGGAAC TGAAACATCT AAGTACCCGG AGGAAAAGAA ATCAACCGAG ATTCCCTAAG
TAGCGGCGAG CGAAAGGGGA GCAGCCGATG ATTTAAGAGG TAGTGGAACA GTCTGGAAAG
TCTGGCGATA CAGGGTGATA GCCCCGTACA CGAAATCTCT TAAGTCACAT ATTAAGTAGG
ACGGGACACG TGTTATCTTG TCTGAAGATG GGGGGACCAT CCTCCAAGGC TAAATACTCC
TAACTGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGCG AAAAGAACCC CGGAGAGGGG
AGTGAAATAG ATCCTGAAAC CGTGTGCGTA CAAGCAGTTG GAGCTCTTCG GAGTGACAGC
GTACCTTTTG TATAATGGGT CAGCGACTTA TTGTATGTGG CCAGGTTAAC CGCTTAGGGG
AGCCGTAGGG AAACCGAGTC TTAATAGGGC GTCCAGTCGC ATGCAATAGA CCCGAAACCC
GGCGATCTAT CCATGGGCAG GTTGAAGGTT AGGTAACACT GACTGGAGGA CCGAACCCAC
TAACGTTGAA AAGTTAGGGG ATGACCTGTG GATCGGAGTG AAAGGCTAAT CAAGCCGGGA
GATAGCTGGT TCTCCCCGAA AACTATTTAG GTAGTGCGTC ATGTCTCACC CACGGGGGTA
GAGCACTGTT TGGGCTAGGG GGTCATCCCG ACTTACCAAC CCCATGCAAA CTCCGAATAC
CGTGGAGTGC AATCATGGCA GACAGACTGC GGGTGCTAAC GTCCGTAGTC AAGAGGGCAA
CAACCCAGAC CGCCAGCTAA GGTCCCAAAT ATCAGTTAAG TGGGAAACGA TGTGGGAAGG
CTTAGACAGC TAGGAGGTTG GCTTAGAAGC AGCCACCCTT TAAAGAAAGC GTAATAGCTC
ACTAGTCGAG TCGGCCTGCG CGGAAGATTT AACGGGGCTC AAACTGATAA CCGAAGCTGC
GGATACTTTC GAGTATGGTA GGGGAGCGTT CTGTAAGCCT GTGAAGGTGA ACTGAGAAGT
TTGCTGGAGG TATCAGAAGT GCGAATGCTG ACATGAGTAA CGATAAGGGG AGTGAAAAAC
TTCCCCGCCG GAAGATCAAG GTTTCCTGTC CAACGCTAAT CGGGACAGGG TTAGTCGGCC
CCTAAGGCGA GGCAGAAATG CGTAGTCGAT GGGAAGCGCG TTAATATTCG TGCACCGACT
GTTGCTGCGA TGGAGGGACG GAGTAGGCTA GGCGAGCACG GCGTTGGTTG TCCGTGTTTA
AGCTTGTAGG CTGGTGACTT AGGTAAATCC GGGTCGCTAA GGCTGAGAGG TGATGACGAG
TCCTCTTTTG GACGAAGTCG TTGATGCCAT GCTTCCAAGA AAATCTTCTA AGCTTCAGGT
AACAGTTGAC CGTACTGTAA ACCGACACAG GTGATCAGGT AGAGAATACC AAGGCGCTTG
AGAGAACTCG GGTGAAGGAA CTAGGCAAAA TAGTACCGTA ACTTCGGGAG AAGGTACGCC
GGTTTTGGTG ATGGGACTTG CTCCCTAAGC TGAGACTGGT CGAAGTGACC AGGTGGCTGC
GACTGTTTAT TAAAAACATA GCACTCTGCA AACACGAAAG TGGACGTATA GGGTGTGACG
CCTGCCCGGT GCCGGAAGGT TAATTGATGG GGTTAGCTTC GGCGAAGCTC TTGATCGAAG
CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT
AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCCACGCT GTCTCCACCC GAGACTCAGT
GAAATTGAAA TCGCAGTTAA GATGCTGTGT ACCCGCGGCT AGACGGAAAG ACCCCGTGAA
CCTTTACTAC AGCTTTGCAC TGAACTTTGA GCCTACTTGT GTAGGATAGC TGGGAGGCTT
TGAAACTTAG ACGCTAGTTT GAGTGGAGCC AATCTTGAAA TACCAGCCTG GTATGTTTGA
GGTTCTAACC TAGACCCCTT ATCGGGGTTG GGGACAGTGT ATGGTGGGTA GTTTGACTGG
GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GTACGAAGGT GCGCTCAGCA TGGTCGGAAA
TCATGCATTG AGTATAATGG CAAAAGCGCG CTTGACTGCG AGACTGACAC GTCGAGCAGG
TACGAAAGTA GGTCATAGTG ATCCGGTGGT TCTGTATGGA AGGGCCATCG CTCAACGGAT
AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCACATCG ACGGCGGTGT
TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GCCGGTCCCA AGGGTATGGC
TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTTAGAAC GTCGTGAGAC AGTTCGGTCC
CTATCTGCCG TGGGCGTTGG AAAGTTGAGA AGAGTTGCTC CTAGTACGAG AGGACCGGAG
TGAACGAACC ACTGGTGTTC GGGTTGTCAT GCCAATGGCA TTGCCCGGTA GCTATGTTCG
GACGGGATAA CCGCTGAAAG CATCTAAGCG GGAAGCCTCC TTCAAGATTA GCTTTCCCTG
GGGCTTGACC CCCTAAAGGG CCGTTGAAGA CTACGACGTT GATAGGTCGG GTGTGGAAGC
GCTGTGAGGC GTTGAGCTAA CCGATACTAA TTGCCCGTGA GGCTTGACCA TA
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| Protein sequence | |
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