| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_4015 |
|---|
| Symbol | |
|---|
| ID | 3967434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 5056415 |
|---|
| End bp | 5056690 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637923112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_529482 |
|---|
| Protein GI | 90023655 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.20976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.241605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGT GTTGTAAAAA AAGCCGAAAA GCTAACAGCG ACCCAACCAG AAAAAACTGG
TTAAACCTTC CCCTGCTTGC CCTAATTAAA GTGTACCGCT ACGCCATTAG CCCATTGTTG
GGCCCGCGCT GTCGATTCGA ACCCACCTGT TCCAGCTATG CCGAACAAGC GCTGATTGAA
CACGGGCCGT TTAAAGGTAC AATGCTCGCC CTATCAAGAC TGAGCAAATG CCACCCTTGG
CACGCTGGCG GGTATGATCC CGTTCCTAAA AAATAA
|
|---|
| Protein sequence | MEACCKKSRK ANSDPTRKNW LNLPLLALIK VYRYAISPLL GPRCRFEPTC SSYAEQALIE
HGPFKGTMLA LSRLSKCHPW HAGGYDPVPK K
|
|---|
| |