Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3996 |
Symbol | |
ID | 3967415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 5029533 |
End bp | 5030024 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637923093 |
Product | glycyl-tRNA synthetase, beta subunit |
Protein accession | YP_529463 |
Protein GI | 90023636 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.318499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTGTTTG TGTTCACAAC TGAAGGCAAC CTTATGCAAC ATACCATCGC TATTTTACCC GCCATGCTTG CGCTGTTAGC TGGGGCTGCT ATTGCTGTGC AAGCCAGCCT TAACGCCAAG CTTGGGGTAC TTATTCACCA CCCACTTATA GCTACCAGCG TAGCCTTTAG TTGCGCTGCT TTGTGTGCCG TTGCAATGGT ACTTATTACC ACACGGTATT ATCCGCCCTT ACACCTCATT AAAAGCGTGC CCATTTATAT GTGGTTTAGT GGCGGGTTAC TTAGCGCATT TGGTGTGGGT ATGTTTTATT TTTTAATCCC AAAAATGGGA GTAGGGTCGT TAATGAGCTA CGCCCTTACA GGGCAAATAG TTATTGCTAT TGTTGCTAGC CATTTCGGTT GGTTTGGTTT ACCGCAAGCC ACTATTACCG CCACCAAAGC TTGCGGCATG TTCGCCCTTG TGGGCGGCAT AGTGCTAATT AATTGGGTGT AG
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Protein sequence | MVFVFTTEGN LMQHTIAILP AMLALLAGAA IAVQASLNAK LGVLIHHPLI ATSVAFSCAA LCAVAMVLIT TRYYPPLHLI KSVPIYMWFS GGLLSAFGVG MFYFLIPKMG VGSLMSYALT GQIVIAIVAS HFGWFGLPQA TITATKACGM FALVGGIVLI NWV
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