| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3977 |
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| Symbol | |
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| ID | 3967300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5008591 |
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| End bp | 5009538 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637923074 |
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| Product | transcriptional regulatory protein |
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| Protein accession | YP_529444 |
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| Protein GI | 90023617 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.121113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTAAAT TCTCGACATT TGCAAAATTG ATATGCAAAA ATGCACAGAT GAATAATTGG
GATGATTTGC GCTATTTCTT AGAGTTGGCC CGTTGTGGCA GCTTATCGGG TGCATCGCGG
GAACTGGGAG TAAACCATTC CACCGTTGCG CGGCGCATTG CCGCGCTGGA AAAAAAGCAC
GGCGTGAAGC TGTTTAATCG CCAGCCAAAT GGTTACCAGT TAACTGAAGC GGGCGATGTT
ATTTATCAGC ACGCGTTGGA AATTGAACAG CAAAATCAAA CGGTTGAGCG CTTACTTTAC
GCTGGGGATA CACGTTTATC CGGCAAGCTT GTGGTGACGA TGCCGCACGA ACTGGCCAAC
CACTGTATTA TTCCCTACCT ACAAGACTTC ACAGGCAAAT ACCCAGATGT GGATCTCGAG
CTAGTGGTAA GCCCTGGCTT AAAAAACCTA TCCGCCCGCG AAGCCGATAT TGCCGTGCGG
GTCACCCCTG CCCCGCCAGA AACGCTCGTG GGCCAAAAGC TCGCAAATTT GCGCCACGCC
GTGTACTTTT CTAAGCAGCA CCCTCAGGTG CTAGCCGAGC AAAAAATCAT TATTTGGCGC
CAAGATACCA ACCCGCCCGC GTGGGCGCAG CAGCACTTCC CCAATGCCAA AGTGGTGTTA
AAAGTGGACG ACCTCGCCTC GATGTATGCC GCAGTAAAAG TAGGCATTGG AATTGCGCGC
ATGCCCTGCT ACCTGCCCGA TAGCGTGTTG GATGCGGATA TTTTTAAGCT CGATTTAGCG
CTTACCCCAT CCGATTGGGG TATTTGGGTG TTGCACCACG CAGACTTGCG AGAAACCGCC
CGCGTACGCG CGTTTAAACA GTTTTTAATC GAAAGGTTGC AAATACTTAG ACCGCTGTTT
GAGGGCGAGA TGGGTAAGCG TGTAAACGGT GATTACTCAT CGAGTTAG
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| Protein sequence | MRKFSTFAKL ICKNAQMNNW DDLRYFLELA RCGSLSGASR ELGVNHSTVA RRIAALEKKH
GVKLFNRQPN GYQLTEAGDV IYQHALEIEQ QNQTVERLLY AGDTRLSGKL VVTMPHELAN
HCIIPYLQDF TGKYPDVDLE LVVSPGLKNL SAREADIAVR VTPAPPETLV GQKLANLRHA
VYFSKQHPQV LAEQKIIIWR QDTNPPAWAQ QHFPNAKVVL KVDDLASMYA AVKVGIGIAR
MPCYLPDSVL DADIFKLDLA LTPSDWGIWV LHHADLRETA RVRAFKQFLI ERLQILRPLF
EGEMGKRVNG DYSSS
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