| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3955 |
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| Symbol | |
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| ID | 3967220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4984084 |
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| End bp | 4985019 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637923052 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_529422 |
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| Protein GI | 90023595 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.116916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.984212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAC TAACCGCTCT TAAATTTTTT ATAGCGACTG CCGATTGCGG TAGCTTTTCG
GGTGCAGCCA AGCAATTTGG CAGCGACCCT TCCACCATAA GTAAAGCCGT AAGGCGTTTA
GAAACCGAAC TGGGCGTACT GCTTTTTCAC CGCACCACAC GTTCATTAGC GCTTACCGAA
GCGGGCCACC AATATTTAGG TACGGCAAAA TCAGTAACCG AAAGTTTAAA TAACACTGAG
TTTGAACTGG CCGACAAAAG CAACGAGCCG CGCGGTACTT TGCGCATAAA CGCGCCTTTT
ACCTATGGCC GCCGCTACTT AGTGCCAGCC ATTCAAAGCT TTAGGGAGAA ATACCCCCAA
GTAAAATTCG ACCTGCAATT TAACGATGCC TATATAGACA TAATTGAAAA CCGGTTTGAT
ATAGCCCTGC GCAGTGGCTC GCTTAAAGAT AGCCGCCTAA TTGCCCGCCA GTTAAGCCCA
ATGGACTTTG TTGTGTGCGC CTCGCCCGAC GTGGCGGCTT CCCTGCCCGC CGACTTTAGC
CCCATGCATT TTAATCAGGT ACCTTGGGTG CGCTTTCGCT TTAAGCAAAC GGGCAAACTT
ATGCCCATAT TATTCAAAGT GGACGGCATA ATCGCCGAAA TGGAATGCAA CGCAGACTTA
GTTGTAGACG ATGGTGAATC CATGACTGAA CTGTGCGTGC AAGGTGCAGG GCTGGCGCAA
CTACCCCACT TTGCCCTCAA AGCCGATTTA GACGCTGGCA GATTAGTGCC ACTGTTCCCA
AGCTGCACCT ATAGCAGCTT TGGTATTCAC ATAATTTACC CCAAACGCGA ATACCTGCCC
CTAAAAACAC GCTTGTTTAT AGATCATATG CAACGTTTTG TGGAAGACCT AGGGGAGACA
CCGCAGAGTA CCTGGGCGAG AGAGCTTAGA AGATAG
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| Protein sequence | MDKLTALKFF IATADCGSFS GAAKQFGSDP STISKAVRRL ETELGVLLFH RTTRSLALTE
AGHQYLGTAK SVTESLNNTE FELADKSNEP RGTLRINAPF TYGRRYLVPA IQSFREKYPQ
VKFDLQFNDA YIDIIENRFD IALRSGSLKD SRLIARQLSP MDFVVCASPD VAASLPADFS
PMHFNQVPWV RFRFKQTGKL MPILFKVDGI IAEMECNADL VVDDGESMTE LCVQGAGLAQ
LPHFALKADL DAGRLVPLFP SCTYSSFGIH IIYPKREYLP LKTRLFIDHM QRFVEDLGET
PQSTWARELR R
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