| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3954 |
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| Symbol | |
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| ID | 3967219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4983293 |
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| End bp | 4983952 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637923051 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_529421 |
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| Protein GI | 90023594 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0392514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC CATTAGCAGC ATTGTGTTTA GTGTTACTTA CATGGGCAGG CAGCGCCCAT
GCCGATAAGC GTATAGGTAT TTTGGTGTAC GACGGGGTGC TAACGTCGGA TGTGACTGCG
CCGCTAGAGG TATTTGGCAT TGCTAGCCGC AAATCGTGGT TTACCGATTA CCAAGTAATA
ACCATTGGCT TAACCCCCGC CAAAACCATT AAAACAGAAG AAGGTTTGGT GTTGGGGGTA
GATACCTGGG TGGGGGCAAC CCCAGAGCTA GATGCAATAA TTACCACCTC GGCCTACGAT
ATGGATGCCC CCAATGCCAG CCAAGCGCTG ATGACGCTTA TACAAAAAAC CGCGGCTAAA
GGCGGGTATT TGGCAAGCAA TTGCTCAGGC GCTTTTTTAT TGGCGCAGGC GGGTGTGTTA
GATGGCAAAA AAGCAACCAC GTGGGCAGGT GGTGAAAAAG ACTTGCAGAA GCAATTCCCA
AAAGTAAACG TTCAGGTAGA CACTAACGTT GTGGTCGACG GCAACATCGT TACCTCTAAC
GGCAGTTTAG TGAGTTACCA AGCCGCGTTA ACACTGCTTA AATTATTGAG CTCGGAAAGC
AAAGCGAAAG AAGTGGCCGA CGTTTTACAA TACAGTCGTT TTTCTAGTAA AGCATTCTAA
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| Protein sequence | MFKPLAALCL VLLTWAGSAH ADKRIGILVY DGVLTSDVTA PLEVFGIASR KSWFTDYQVI
TIGLTPAKTI KTEEGLVLGV DTWVGATPEL DAIITTSAYD MDAPNASQAL MTLIQKTAAK
GGYLASNCSG AFLLAQAGVL DGKKATTWAG GEKDLQKQFP KVNVQVDTNV VVDGNIVTSN
GSLVSYQAAL TLLKLLSSES KAKEVADVLQ YSRFSSKAF
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