| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3948 |
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| Symbol | |
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| ID | 3967213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4976518 |
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| End bp | 4978353 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637923045 |
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| Product | glutamine--fructose-6-phosphate transaminase |
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| Protein accession | YP_529415 |
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| Protein GI | 90023588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.739647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TTGTTGGTGC AGTAGCGCAG CGAGATGTAG TAGATATATT AGTAGAAGGC
CTTCGCCGCT TAGAATACCG CGGTTACGAT TCGGCAGGTG TTGCCGTACT TAATGCCGAA
GGCGAACTAA GCCGTTTGCG TCGTTTAGGT AAAGTAAAAG AGCTGGCCGA CGCCGTAGCA
GAAAGCCCCG TATTGGGCGG TACCGGTATT GCTCACACTC GTTGGGCCAC CCACGGCGAG
CCAAGCGAGC GCAACGCTCA CCCACACGTT TCCAACAAAA CTATCTCTGT AGTGCACAAC
GGTATTATCG AAAACCACGC CGAGTTGCGC ACCATGCTTA AAGGCGAAGG CTGTGAATTC
AGCTCCGATA CCGATACCGA AGTGATTGCC CACTTTGTAC AAACTCGTTT AGACGCTGGC
GATGCTAGCT TGCTAGAAGC AGTGCAAAAC ACCGTAAGCA AATTAGAAGG TGCCTACGGT
ACCGTTATTA TGGATAGCCG CGATCCAAGT CGAGTGATAG TTGCGCGCTC TGGCAGCCCA
TTGGTAATTG GTTTAGGTAT TGGTGAAAAC TTTATTGCAT CCGACCAACT TGCGTTATTG
CCAGTAACGC GCCGCTTTAT GTTTTTAGAA GAAGGCGACG TAGCAGAAAT TACTCGCACA
TCCGTAAATG TATTCGATAA AGACGGCAAC GCCGTAGAGC GCGAAGTAAG CGAATCTACC
GCCAGTTACG ACGCCGGCGA CAAAGGCGAA TATCGCCACT TTATGTTAAA AGAAACTTAC
GAGCAGCCAA CAGCCATTAC CAACACCTTA GATGGTCGTT TAGGCAGTGG CACCGTATTG
GACGAAACTT TCGGCAACGG CGCGGCAGAA TTATTTAAAA AAGTGAAGCA CGTACAAATT
GTTGCCTGCG GTACCAGTTA CCACTCGGGT ATGGTTGCGC GCTACTGGTT GGAATCCGTT
GCGGGAATAT CTTGTAACGT AGAAATCGCT TCCGAATTCC GCTATCGCAA ATCGTTTGTC
CAGCCTAATA GCTTGCTTGT AACTATTTCT CAATCTGGCG AAACTGCCGA TACCCTTGCC
GCATTGCGCT TAGCAAAAGA TTTAGGTTAT TTGGGTAGCT TAACTATTTG TAACGTTGCC
GGCTCGTCAT TAGTACGCGA ATCGGATCTC GCATTTATGA CCCGCGCGGG CGCCGAAATT
GGTGTGGCTT CTACCAAAGC ATTTACTACC CAGTTAGTGG GCTTTGCCAT GTTGGTATTG
GCATTAGGCA AATACAACGG CATGAGTGAA GCGGACCAAG CAGAATTAAC GCAAGCGCTT
AAACTGTTGC CAGGCAAACT AGAAGAAACC CTAGAGCTAG CCAGTCAAAT TGAAGGCCTA
GCCGAAGAAT TTGCCGATAA ACACAACGCA TTGTTTTTAG GTCGTGGCGA CCAATACCCC
ATCGCAATGG AAGGCGCACT AAAACTGAAA GAAATTTCTT ACATACACGC AGAAGCCTAT
GCTGCCGGTG AATTAAAGCA CGGCCCACTT GCGTTAATTG ATGCCGACAT GCCAATCATT
GTTGTTGCAC CAAACAACGA CCTGTTAGAA AAATTAAAAT CTAACGTAGA GGAAGTACGC
GCACGCGGGG GTATACTTTA TGTATTCGCC GACGTAAACG CCCACTTCGA AAGCGACGAC
ACCATGCGCG TAATAAACGT ACCGCACGTA CACCCCCTAC TAGCCCCAAT CGTATACACA
TTGCCTTTGC AGTTGTTGTC TTACTATGTG GCAATTATTA AAGGTACAGA TGTAGACCAA
CCGCGCAACT TGGCAAAATC TGTTACGGTT GAATAA
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| Protein sequence | MCGIVGAVAQ RDVVDILVEG LRRLEYRGYD SAGVAVLNAE GELSRLRRLG KVKELADAVA
ESPVLGGTGI AHTRWATHGE PSERNAHPHV SNKTISVVHN GIIENHAELR TMLKGEGCEF
SSDTDTEVIA HFVQTRLDAG DASLLEAVQN TVSKLEGAYG TVIMDSRDPS RVIVARSGSP
LVIGLGIGEN FIASDQLALL PVTRRFMFLE EGDVAEITRT SVNVFDKDGN AVEREVSEST
ASYDAGDKGE YRHFMLKETY EQPTAITNTL DGRLGSGTVL DETFGNGAAE LFKKVKHVQI
VACGTSYHSG MVARYWLESV AGISCNVEIA SEFRYRKSFV QPNSLLVTIS QSGETADTLA
ALRLAKDLGY LGSLTICNVA GSSLVRESDL AFMTRAGAEI GVASTKAFTT QLVGFAMLVL
ALGKYNGMSE ADQAELTQAL KLLPGKLEET LELASQIEGL AEEFADKHNA LFLGRGDQYP
IAMEGALKLK EISYIHAEAY AAGELKHGPL ALIDADMPII VVAPNNDLLE KLKSNVEEVR
ARGGILYVFA DVNAHFESDD TMRVINVPHV HPLLAPIVYT LPLQLLSYYV AIIKGTDVDQ
PRNLAKSVTV E
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