| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3908 |
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| Symbol | |
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| ID | 3967173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4925760 |
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| End bp | 4927649 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637923005 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_529375 |
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| Protein GI | 90023548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCG ATTCCACGTT CAAACAATTA ACGCTTGCTG CGTTAATTTC TAGTTTAGTT
GCTTGTAGCG GCGATGATGG TGCCAAAGGT GAGAAAGGCG ATACCGGTGC ACAGGGCCCT
CAGGGTGAGC AAGGTGTTGC TGGTTCGAAC GGCGAAAATG GCGTGGATGC AACGCCAAAC
ACCATCGCTA TTAAATTTAT TGGCCGTTAC GAAAGCGGCG AGTTTGACGA AAGCGCAGCA
GAAATTGTTG CCTATGATGC AGCTACCGAG CAGGTTTTTG TAGTAAATGC CAATTCCGGC
ATGGTGGATG TGCTGGATAT CAGCGAGCCA TCACTCCCCG TATTAGTTAG CTCATTAGAT
TTAGGTACAG ATATCGCCGC GGCTCTAAGC AGTGTGGCCA GCGCCGATGC GTTAGGTGCT
GCAAACAGCG TGGCCGTTAA AAACGGTGTG GTGGCGGTAG CTGTAGAAGC CAGTAATAAA
CAAGCCAATG GCTATATAGC GTTTTATCAA GCAGACGGCA CTTTTTTAAG TGCAGTAGAG
GCCGGCGCCC TACCTGACAT GGTTACCTTT AGCCCAGACG GCAATAAAGT GTTAGCGGCA
AACGAAGGCG AGCCAAATGG CGATTACAGC GTAGACCCAG AAGGTAGCGT AACAGTTGTA
GATATTTCTG CAGGTGTTGC GAGCGTAACG TCTGCGAATG TAACCCACAT TACCTTTACC
GATTTTAATG TTGGCGGCAG CCGCGAAAAT GAATTGGCTA ACGATGTGCG CATTTCGAGC
AAAAGCGCAT CGGTAGCACA AGATTTAGAG CCAGAGTACA TAGCAGTATC TGCCGACAGC
CAAACAGCAT GGGTTGCGCT ACAAGAAAAC AATGCCTTAG TAGAAATAGA CTTAGCCGAT
AACAGCATTA GTGCAATTTT AGGTTTAGGC TATAAAAATC ACGCTGTACT AGGTAACGAG
TTAGATGCAA GTAACAAAGA CGACAGCATC AACATTACCA ACTGGCCAGT ACGCGGTTTA
TTTATGCCAG ATTCAATCGA TGCCTATCAG TTTGGTGGCG TAAATTATTT AATTACCGCC
AACGAAGGCG ATGGGCGCGA ATACCTTACC GATGCAGCCG ATGAAAGCGC CTGTACTGCA
GCTGGTGGTT TTGACTTTGA CGATGGCGAT TGCTTCCACT ACTTAGACGA AATTCGTTTA
AAAGATATTG AAGACACTGG CGCTACGGTT AACTTAGATG ATCTTGCCCG TTTCGCACCC
GACTTCGATA CCCTCGCCGA AGACGAAAAC CTAGGCCGTA TTAAAATAGT CGCGAATATG
GGTGTGTCTG GTTGCGACAC CGATACCTTT GCCACTACAG GTCAACCGAG CACGGGTTGT
GAATACGAAG CGCTTTACAC CTACGGTGCG CGTTCATTCT CTATTTGGAA TGCAGAAACT
GGCGACTTAG TTTTTGACAG TGGCAGTGAT TTCGAACGCA TTACCGCGCA GCGTTTGGGC
GACGAGTTTA ATGCAACCAA CGACGAAAAC GGTGGCGACG ACCGCTCTGA TGATAAAGGC
CCAGAGCCAG AAGCGATTGA AATTGCACAA ATCGGCGGTA AAACCTATGC GTTTATAGGT
TTAGAGCGCG TTGGCGGCAT TATGGCTTAC GATATTACCC ACCCAGAATC TGCTCGTTTT
GTACAATACA TAAATACGCG CAATTTTAGT GTAGATATTG AAGACTTAGT TGATGGCGGT
GACTTTTCTG CTGTTGGCGA TTTAGGCCCA GAAAGCATTT TATTTATAGC CGCCGAAGAT
AGTCCAAGCG GCGTTGCCTT GCTAGTAGTG GGCAATGAAG TGAGCGGTAC TACCGCCATT
TTTGAAGTAA ACTTAGTAAG CGCTAATTAA
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| Protein sequence | MTFDSTFKQL TLAALISSLV ACSGDDGAKG EKGDTGAQGP QGEQGVAGSN GENGVDATPN
TIAIKFIGRY ESGEFDESAA EIVAYDAATE QVFVVNANSG MVDVLDISEP SLPVLVSSLD
LGTDIAAALS SVASADALGA ANSVAVKNGV VAVAVEASNK QANGYIAFYQ ADGTFLSAVE
AGALPDMVTF SPDGNKVLAA NEGEPNGDYS VDPEGSVTVV DISAGVASVT SANVTHITFT
DFNVGGSREN ELANDVRISS KSASVAQDLE PEYIAVSADS QTAWVALQEN NALVEIDLAD
NSISAILGLG YKNHAVLGNE LDASNKDDSI NITNWPVRGL FMPDSIDAYQ FGGVNYLITA
NEGDGREYLT DAADESACTA AGGFDFDDGD CFHYLDEIRL KDIEDTGATV NLDDLARFAP
DFDTLAEDEN LGRIKIVANM GVSGCDTDTF ATTGQPSTGC EYEALYTYGA RSFSIWNAET
GDLVFDSGSD FERITAQRLG DEFNATNDEN GGDDRSDDKG PEPEAIEIAQ IGGKTYAFIG
LERVGGIMAY DITHPESARF VQYINTRNFS VDIEDLVDGG DFSAVGDLGP ESILFIAAED
SPSGVALLVV GNEVSGTTAI FEVNLVSAN
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