| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3872 |
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| Symbol | |
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| ID | 3967039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4880764 |
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| End bp | 4882734 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922969 |
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| Product | phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like |
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| Protein accession | YP_529339 |
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| Protein GI | 90023512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.53722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.168213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATAAAA ACACACCACT ATTGTTGATA TGCCTAGTTG CCCTGCTGCT ATATTGCCAA
AGCGCCACAG CCGCACCACG GTACAGCTAT ACCCTTGCCG ATGCCGATAC CTTTACCAAC
CTTAAAGCCC AACCACTTGG CAGCCAATAC GCGGGGGTAG AATCGGTAAA AATTGTGTAT
GCACTTGGCC GCGAACGGCT GTATTTTGTT AACTCTAAGC GCTATAGCTA TCACTACAGT
TTTTGCAAAG ATGTGCTTAA TTACACATCC TCGTTAGATA CCTTTAACGC GCACAATTAC
ACCTTATCGC CCAAACGAAA ATACCTTTTG GCTACGCTCT CATACCACCC CGCGCTAGAT
ACTTACGCTT TAGAGCTTGC CCCATCCGAC GAAATGCCGT TGGAGCAAAT CCAACTGTTA
CTTACAAAAC TAAAACACGC ATTTTTCGCA CAGCATAAGC TCGCCCTGTT GCTAAACACC
TCGCGCCTGC ACTTAGCGGC TGCGCGGCTA ACTCATACCG CCACCATTAC CCCAGATGCG
CTGTATAAAG GCCAAACCTA TCAACTGCTT ACTCCCGGCA AAGCCATTGG CCTGCTTACA
GAAGTAGATG CCGCAGGTAT AGATGCCCTC AACTTACCCG AGCACACCTT GGCTTTAATT
AACGGCACCC CGCTTACCGT GCCGCCTTTA GCCGGTATTA TCACTACCGA TTTCCAAACC
CCTTTAAGCC ATATGGCAGT GCTTAGCCGC AACCGAGGCA CAGTGACTAT TGCGCAAAAA
TTTGCCCCAC AGCACGAGCA AATCAAACCG CTTATTGGTA GCTGGGTAGA GCTTGTAGCA
GATGAAAACG GCTTTAGCCT CTCACCGTCT AGCCAGCAGG CGTACAACCA GTGGCGCAAG
CGTAAAACCA CCAAGAGCAT TACCCTTAGT AGCAACCTCA ACCCCAGCCC TTTGTTAGAT
ATAACCAAGC TGCGCTATAA GGATATTGAG CGTGTAGGAG GCAAAGCGGC CAACTTTGCC
GAATTGCAAT TTGTGCTAAC TCAGGTTGCC AATAGCGGAC TAACTAACAA AACTGCCAAC
GCACAGCCAA ACATTGCGGC TAAGACCCCT GAAGGCGCTT TCGCCATCCC TTTTTATTTT
TATCACCAAC ATATTCAGCA ACCCGCCATT CAGCAGGCGC TTAACGCTGT TTTACAGCTC
GATAGCAATA CCAGCGATAA CCATACGTTA AAGCAGCACC TCGCTACCCT GCGCGATGCC
ATCGAAACGG CACCGCTCGC GCCCGAGCTA GTAAAAGCGG TTGAGCAGCG CATGGTGAAT
GGTGGCTTCG ACCGCCTTAG ATTTCGCTCA TCCACCAATG CCGAAGACCT GGAAGGCTTT
AGTGGTGCGG GCTTATACAC CTCTAAAACT GGGCACCTAT ACAAACCTAA AAAAAACATA
GAGCGTGCAA TTAAAAAGGT ATGGGCCAGT ACTTGGCGTT ACGCAGCTTA TGCAGAGCGC
GCCTATTTCG GTATAGAACA ACACACCGTC GCCATGGCCG TACTCGCCCA CCGCTCGTTT
CCCAATGAGA TAGCTAACGG CGTTGCTATT ACCCGCAACC TATACCGCAG CGATTACCCA
GCATTTGTCA TTAATGTGCA AAAAGGTGAG GAGAGTGTGG TGCAACCTAG CCCTGGGGTG
AGTGTGGATC AGCTTATTAG CTATCGCGGC GTGTCGGACC TAACCGATGA AGAAGGCCCG
CCGCGCTACA TCACCTACTC CAGCCTTAAT AATGGTGTAC CCATTTTGAC GGATGAGGAA
ATTTTTACTC TCACTACTGT GTTAGATACC CTTAAAAAGC ACTTTTACCA CAAGGTGAAC
AAACACCATC GCCGTTACAA GTATCAAAAC TTCGCTTTAG ACGTAGAGTT TAAATATATG
GGGCCAGAAC GGGTTTTATA TATTAAACAA GCTCGTTTGT TTAACGATTA A
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| Protein sequence | MNKNTPLLLI CLVALLLYCQ SATAAPRYSY TLADADTFTN LKAQPLGSQY AGVESVKIVY
ALGRERLYFV NSKRYSYHYS FCKDVLNYTS SLDTFNAHNY TLSPKRKYLL ATLSYHPALD
TYALELAPSD EMPLEQIQLL LTKLKHAFFA QHKLALLLNT SRLHLAAARL THTATITPDA
LYKGQTYQLL TPGKAIGLLT EVDAAGIDAL NLPEHTLALI NGTPLTVPPL AGIITTDFQT
PLSHMAVLSR NRGTVTIAQK FAPQHEQIKP LIGSWVELVA DENGFSLSPS SQQAYNQWRK
RKTTKSITLS SNLNPSPLLD ITKLRYKDIE RVGGKAANFA ELQFVLTQVA NSGLTNKTAN
AQPNIAAKTP EGAFAIPFYF YHQHIQQPAI QQALNAVLQL DSNTSDNHTL KQHLATLRDA
IETAPLAPEL VKAVEQRMVN GGFDRLRFRS STNAEDLEGF SGAGLYTSKT GHLYKPKKNI
ERAIKKVWAS TWRYAAYAER AYFGIEQHTV AMAVLAHRSF PNEIANGVAI TRNLYRSDYP
AFVINVQKGE ESVVQPSPGV SVDQLISYRG VSDLTDEEGP PRYITYSSLN NGVPILTDEE
IFTLTTVLDT LKKHFYHKVN KHHRRYKYQN FALDVEFKYM GPERVLYIKQ ARLFND
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