Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3852 |
Symbol | |
ID | 3967001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4854982 |
End bp | 4855620 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637922949 |
Product | UbiE/COQ5 family methlytransferase |
Protein accession | YP_529319 |
Protein GI | 90023492 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTT ATATGAATAC ATCCGAAAAA TACTGGAATA AAAAAGCAGA AGGGTATGCA AAAAGTCCAG TTTCCGACGA GGAGACCTAT AAGAGAAAAC TCACCGAAAC GCAAAGCTTT TTACAGCCAA AAATGCGGCT TTTAGAGTTT GGCTGTGGAA CAGGAACAAC CGCAATACAT CACGCATCAC ATGTATTGCA TATTGATGCA ATTGATATAT CTGAGAACAT GCTTAATATT GGTCGTGAGA AAGCCAGCAA TGCAGGTGTT GCAAACATTA CGTTCACTCG TTCCACTCTG ACAGAATTTA ATGCAGGTGC AGCTAGTTTG GACGCTGTTT TGGGTTTAAA TGTTATTCAT TTACTACCAG ATAGGCAGTC TGTACTCACT GAAGTGGCTA GAATTTTAAA GCCTGGTGGT GTTTTCGTTA GTAGTACCGT TTGCCTAGGT AATTCGTACT TCCGCTTTAT TAAACCATTT GTACCTCTAG GCAAGTTCCT AGGGGTAATG CCTGATGTGT ATGTGCTGAC GGAATCTGAA TTGGCTAGCG AAGTCCGTGA TGCTGGATTT ACAATTGAAC GCCAGTGGCA TCATGGGCCT AAAGATGTTG TTGTTTTTAT GGTTGCGCGG AAATTATAA
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Protein sequence | MEVYMNTSEK YWNKKAEGYA KSPVSDEETY KRKLTETQSF LQPKMRLLEF GCGTGTTAIH HASHVLHIDA IDISENMLNI GREKASNAGV ANITFTRSTL TEFNAGAASL DAVLGLNVIH LLPDRQSVLT EVARILKPGG VFVSSTVCLG NSYFRFIKPF VPLGKFLGVM PDVYVLTESE LASEVRDAGF TIERQWHHGP KDVVVFMVAR KL
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