| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3828 |
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| Symbol | |
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| ID | 3966939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4827387 |
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| End bp | 4827647 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637922925 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_529295 |
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| Protein GI | 90023468 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGATAG CGAGAATAAA TTTTAAAAAT TCACCCAACA AAGAAGAAAT GAGCATGAGT
AAAGGTACAG TTAAGTGGTT TAATGCAGAC AAGGGCTTCG GCTTTATTAC ACCTGCAGAT
GGCGGCAAAG ATTTATTTGT TCACCATTCA GAAATTCAAG CCGGTGGCGG TTACGCCACT
TTGAACGACG GCCAAGAAGT TGAGTTTGAA GTTGGTCAAG GCCAAAAAGG CCCATGTGCA
AACAAAGTAC AGCCGCTATA A
|
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| Protein sequence | MVIARINFKN SPNKEEMSMS KGTVKWFNAD KGFGFITPAD GGKDLFVHHS EIQAGGGYAT
LNDGQEVEFE VGQGQKGPCA NKVQPL
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