| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3801 |
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| Symbol | |
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| ID | 3966875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4801372 |
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| End bp | 4802634 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922898 |
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| Product | polysaccharide biosynthesis export protein-like |
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| Protein accession | YP_529268 |
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| Protein GI | 90023441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAAA AATTACACCA CCTTCGCCGC GACCGGTTGT TTAGCAACAC CGGCTGGATG
CTTCTCTCTG AGGCAATAGC CAAGGTTAGT CGCCTGCTTA CAGTAGTGAT TATGGCCGCT
CTGCTAACGC CATTGGAGTT CGGTATTGCA TCGTTGGCGC TCGCTTGCCA CGAATTAATA
CGTGTTTTTA GTCGCGCTGG CGCCGGGGCA CGCGTTGTGC AGTGTGATGC GAATCAACTA
CCCGTCACCG CGGCTAACGC ATCACTACTG CAATGGCTTG TGTGCCTTGG CCTAACGGCT
GCACAAATAG CAGCAGCTAA TTACATCGCT CAATTTTATA GCAACCCTGC GCTTGCGCCG
CTGCTTACAC TCATGGCACT TACCTACCTT TGCTACCCCA TAGTTGCAGT AAAAGTATTT
ATGCTGCAGC GGCAAAACAA TATGCAATAT TTCGGCTTAG CTTGCGCCAT TTGCTTATCG
GTAGACAACA TAGCAACCAT TATTTTTCTG TTGCTCGATA TGGGCGTAAT GGCGGTAGCC
TACGCAAAAT TACTGTGTGC TGTTGCATGG GTAGTTATTT TTAGTCGCGT TAAATTAAAG
TCTTATGCAC CTAGCTTTCA ATTAACGGTA TTTAAAGCTT TAGTAAAGCT TACTATACAT
ATTTTTATTG CCGATGCGTT ACGTGTGCTG CGCTCGCAAG CAGATATATT AATAGCGGCG
CGCTTACTAC CCGCGGAATT ATTTGGTTTA TACAGCTTCG CCAAAAACGC TGGCGTAGGC
CTAAGCCAGT CGATAGTAAC GGCCTATGTA AGCGGGCTTT ACCCATTTTT ATGTGAACGG
TTTCGCGCGC GCGAAGTCGG GCAAGCTAGA AAAAAGGCGT TTACCTATGG CGCAGCCATT
AGTGTTTTAT TTATTGCGCA ATCAATAGTC GCACCATTTT ACGTATCGCT TTTTTTCGCC
GAGCAATGGC AATCTGCAGC GGTTATCGTT TCTATTTTAT GTTTGGCCGG TATACCCGCT
ATTTTTACCG ACACTTACGC AATGTTACTG CGCGCCGCCA ACCAAACGTT TAACGAAGTG
GTGCTTATTT TTTATTGTGT TGCTTGCTTA GCCATATCCA TATGGGCACT GCAACCGCAA
AACGCGCTTG CTTTAGCTTC AGCCAGTTTA CTGGGCGGGG CCTTTTGGTG CCTACCTCTA
CTATTTTCAT TTATACAAAC CAAATTTAGC TCTGGTGTGT TTCTTAAAAA GGTACAACTA
TGA
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| Protein sequence | MWKKLHHLRR DRLFSNTGWM LLSEAIAKVS RLLTVVIMAA LLTPLEFGIA SLALACHELI
RVFSRAGAGA RVVQCDANQL PVTAANASLL QWLVCLGLTA AQIAAANYIA QFYSNPALAP
LLTLMALTYL CYPIVAVKVF MLQRQNNMQY FGLACAICLS VDNIATIIFL LLDMGVMAVA
YAKLLCAVAW VVIFSRVKLK SYAPSFQLTV FKALVKLTIH IFIADALRVL RSQADILIAA
RLLPAELFGL YSFAKNAGVG LSQSIVTAYV SGLYPFLCER FRAREVGQAR KKAFTYGAAI
SVLFIAQSIV APFYVSLFFA EQWQSAAVIV SILCLAGIPA IFTDTYAMLL RAANQTFNEV
VLIFYCVACL AISIWALQPQ NALALASASL LGGAFWCLPL LFSFIQTKFS SGVFLKKVQL
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