| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3795 |
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| Symbol | |
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| ID | 3966869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4794160 |
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| End bp | 4795461 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922892 |
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| Product | cold shock protein |
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| Protein accession | YP_529262 |
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| Protein GI | 90023435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTG AAAATTCGCT CTTATCTCAC CTTAAGCAGG TAGCCATTCA GTCGAGTAAG
GGTCTGTTGG TTTGTGTTAT TGCCGCTATC AGCATTGGCT GCACGCAACA GCATGCTATT
CAAACCCCTG CAAACCCATC GCAAAAGTTT TATGGCAACA GCGATGAAAA TGGTGAGCAT
GTAACTCATA TCGATACCTC TAAATATGTG TTCGCATCCA ACAAAAGCTG TGAGCGCGTA
GGTGATGAGC ACAAGGCGAC GCATTACCGT GCCGATCAAG CGCTATTACA AGGGCATGTT
GTTGGATCTG CGCAGGCACC TGTGTCTATT TACAACAAAG ATTTACCCTT AAGCCCAGGT
GATATGCTTG ATGTGCAAAT CGAAAACGGT GAGGGGTTTA ACGGACAATA CGTTGTTGAC
CCAGATGGTT CTATCCAGCT GCCGCTTATC TCGCCTATTC GAATTGCTGG TATAGGTGTC
GCTGGTACAG CAGAAAAAAT TGAAATTGCT TTAGTGCGTG CCGGCATATT TAAACCCGAG
TTTACGCGTG TAAGTGTTCG AGTATTACAT TGGGCAGAAA TTAACGTAAC CGTAACCGGC
GCTGTGTTTG AGCCTGGCCG CGTGCGCATT AATGAAAACC ATCAAGAAAG CATTGTGGCG
GAACGCGTAG CGGCAGTAGG TGACTTTGCC ACTAGGCGAT CAATTGTTGA GGCTATTCGC
ACCGCGTCGG GTATTCGCCC CGATGCAAAA TTAGATCAAG TAATTCTTGT GCGCAACGGC
TGGCAAATAG AGCTGAATTT AAGCGGCATT GTAAGCGGTA ATCCGGTGCA AGATGTGGCC
TTGGTAAATG GTGATCATAT TGTTGTGCCT ACTACTGGCT GTTTTCAATC GGCGCTAGTG
CGCCCTTCGC AAATAACACC TAAAGGCTTT CGCGTTTTTA TGTCGAACCT GACGGTGCCT
TCGACCGATA ACGCCGGCTC AGCAGTAGGC AGATATAGCA GCAGCTTACC CTACGGTACT
ACGTTGTTGC AGGCAGTGGT TTCAGCAAAC TGCGTGGGCG GTACGCAACT TACTAACGCA
CCGCGCAAAG TGGTGTTGGC GAGCCGCAAT CCGCTTACCA GTGAGTATCA AGTTATCGAG
CGCTCTATAG AGCAACTAAT GCGCTCGGCT GGCCGAGAAG ACATTAATCC GTTCTTGATG
CCTAACGATG CAATCGCCTG TTACGACTCT GATGTATCTA ACCTGCGAGA TTTTGCGCGA
ACCTTAGGCG AAGTTATCAC GCCGCTTAAT GTGATTTTCT AA
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| Protein sequence | MQTENSLLSH LKQVAIQSSK GLLVCVIAAI SIGCTQQHAI QTPANPSQKF YGNSDENGEH
VTHIDTSKYV FASNKSCERV GDEHKATHYR ADQALLQGHV VGSAQAPVSI YNKDLPLSPG
DMLDVQIENG EGFNGQYVVD PDGSIQLPLI SPIRIAGIGV AGTAEKIEIA LVRAGIFKPE
FTRVSVRVLH WAEINVTVTG AVFEPGRVRI NENHQESIVA ERVAAVGDFA TRRSIVEAIR
TASGIRPDAK LDQVILVRNG WQIELNLSGI VSGNPVQDVA LVNGDHIVVP TTGCFQSALV
RPSQITPKGF RVFMSNLTVP STDNAGSAVG RYSSSLPYGT TLLQAVVSAN CVGGTQLTNA
PRKVVLASRN PLTSEYQVIE RSIEQLMRSA GREDINPFLM PNDAIACYDS DVSNLRDFAR
TLGEVITPLN VIF
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