| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3740 |
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| Symbol | |
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| ID | 3966775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4740139 |
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| End bp | 4741188 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922837 |
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| Product | lipopolysaccharide core biosynthesis mannosyltransferase |
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| Protein accession | YP_529207 |
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| Protein GI | 90023380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.939916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAAAG AACTAATAGC ATTACTTGTT GGCAACTCCA ACTCGCGCTT TTCTGGCGTG
ACGTCTACTA TGCTGCAAAC TCTGCCTTAT CAGCAAGAAT TAATGCCCCT GCGTGTGCTG
GGGGCACATC ACCTGCCCGA TACATCCATT GCCATTTCGT TTAAACAGGC GCGCAAGCTA
TTAAAGCAAA GCACTGGCCC TGTGGTTTTT CACGCTCGTC GCAACGATGA AATGATACAG
GCGCTTATTT TAAAGCATGT ATTTGGCGCG AATTTAAAAA TTGTTTTTAC GTCTACTGCG
CAGCGTTATC ACAGTGGCTT AACGCGTTGG CTTATTAACC GTATGGATGG TGTTATTTCT
ACTTGCCAAG CGGCAGCGAG CTATATGGTG CGCAAGCCCG ATGTGATTAT TCCCCACGGT
ATTCACAGCG ACAAATACGT ACGCGCCACC AATCGACAAG CAATATTGGC AAAATGGCAA
ATAGTTACCC CCCACGTTTT GGGTATATTT GGCAGGGTGC GCGCGCAAAA AGGGGTGCAT
TTGTTTGTGC GCGGTTGTAT AGCGCAATTA AAAAACAATC CTAATTTTAC CGCATTGGTG
GTGGGTGCTA TTAAGCCCGA AGATAAGCCG TTTGCCGATA GTTTGCAGCG CGAAATAGAT
GCCGCTGGCT TAACGCAGCG GATTCGTATT TTAGGCGAGC AACCATTTGC GGCTTTGCCG
GAACTGTTTT CGGTGATGGA TTTAGTGTGT GCACTGAGTA ATAACGAGGG CTTTGGTTTA
ACCGTACTTG AAGCCATGAG TAGTGGTGCC GCAGTATTGG CAACCGAAGC TGGGGCTTGG
CCCGAGGTAG TGCGTCAAGG GGTAGATGGG CTGGTGGTGC CGGTAGAAAA CCAGCAGGCG
GTAAATGGTG CGTTAGCACA ACTGCTGGCT AACCCTGGCA AGCTTGCTGA AATGGGAATA
AATGGCAGGG CGCGCATTGA AGCGCACTAC CAAGTGCAAA CTGAAGCGAA AGCGCTGTGT
GATTTTTTTA AGCGAGTCGC TAGCAGCTAG
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| Protein sequence | MDKELIALLV GNSNSRFSGV TSTMLQTLPY QQELMPLRVL GAHHLPDTSI AISFKQARKL
LKQSTGPVVF HARRNDEMIQ ALILKHVFGA NLKIVFTSTA QRYHSGLTRW LINRMDGVIS
TCQAAASYMV RKPDVIIPHG IHSDKYVRAT NRQAILAKWQ IVTPHVLGIF GRVRAQKGVH
LFVRGCIAQL KNNPNFTALV VGAIKPEDKP FADSLQREID AAGLTQRIRI LGEQPFAALP
ELFSVMDLVC ALSNNEGFGL TVLEAMSSGA AVLATEAGAW PEVVRQGVDG LVVPVENQQA
VNGALAQLLA NPGKLAEMGI NGRARIEAHY QVQTEAKALC DFFKRVASS
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