Gene Sde_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3716 
Symbol 
ID3966732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4702607 
End bp4703308 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID637922813 
Producthypothetical protein 
Protein accessionYP_529183 
Protein GI90023356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAA ATAGGTATAT CTCTATGAAA AAATTACAGA AAAAAATTTC TAATTTACTG 
TTGGCTTTAA GAAAAATAAG CGATTTAAAA AGAGAGCTAG TGGATAGCTC AGGCCAAGGG
CATTCTCCAC TTGAGCTTTT TTTAGCGGAA TCGAAAAAAT TTGAAAGACC ACGAGTGCTA
GAATTAGGTA CGCTTCGGTC AGACTCTGAT AGGTCGACGA AGCATGATGC TTGGATTCCT
CAAGCTGCTG AGTATCTAGG TCTCGACATT TGTAAGGGCA TAGATGTAGA TGTAGTTGCG
GATATCCATA AGGCAACTGA TACCCTTGGA GAAGAGAAAT TTGATATTAT CATTTCGTGC
TCTTCTTTCG AACATTTTAA ATATCCACAT CTAGCTGCAC ATCAGATAAT GAAGCTCTTG
AAAGTTGGTG GGATCCTATA TATACAAACA CATCAATCGT TCCCTATACA TGCGTACCCA
TATGATTATT TTAGGTTTTC GAGGGAGGCG CTAGAGGGGC TATTCGGTAA AGCTATGAAT
TTTAATGTGG TTTCTTCGGG GTATGACTTT CCTGCGAAAA TAGTCTCGCG AAGGCGCCCT
TTTTCTTTTG TATCACCTGC CTTTTTAAAT GTCACTCTAT ACGGCCTTAA AAAAGGGCCA
ACACCTTCAG AATATATCTA TGAGCTAGAC ACCGAACTTT AG
 
Protein sequence
MALNRYISMK KLQKKISNLL LALRKISDLK RELVDSSGQG HSPLELFLAE SKKFERPRVL 
ELGTLRSDSD RSTKHDAWIP QAAEYLGLDI CKGIDVDVVA DIHKATDTLG EEKFDIIISC
SSFEHFKYPH LAAHQIMKLL KVGGILYIQT HQSFPIHAYP YDYFRFSREA LEGLFGKAMN
FNVVSSGYDF PAKIVSRRRP FSFVSPAFLN VTLYGLKKGP TPSEYIYELD TEL