| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3709 |
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| Symbol | |
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| ID | 3966725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4693439 |
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| End bp | 4695895 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922806 |
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| Product | hypothetical protein |
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| Protein accession | YP_529176 |
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| Protein GI | 90023349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAC TATCTCACCT CAAACACTGC AGGAAATTTT GTATTTCTTT GCTTTGCGCG
CTGGGCATGG CTAATGCTCA CGCCGCATTA AATGTAACTG CATCTGCGGA TGACGGCAAT
GTGCCCGCGA ATACCTTAGA TGACAATATA GATACGCGCT GGTCGGCGAA TGGATCTGGG
CAGTGGATTG AATATGATTT GGGCGCGACA CACACTGTGG ATGCTGTGCA AATAGCATTT
TTTCGCGGAG ATGTGCGCGA TGCAACCATC GACATTCAAG TGTCGAACGA TGGCGGCAAT
TGGCAAACAC TTTTTTCGGG TACGCCACCA ACCCGAACCT TAGCGCAGCA ACATTTTGAG
TTGGATGATA CTTCTGCGCG CTATGTGCGT ATTGTAGGTT ATGGTAACAG CCAAAATAAT
TGGAACAGTA TTACCGAGTT CGATGTGGTT ACGCTTGCAA GTGGAGAAAA TATTGCTCTT
GGTAAAGCTA CATCCCAATC ATCCACTGGC TATGAGGGTG TATCTAGCCG TGCGGTAGAT
GGCAACACCA ATGGTAACTG GAATCAAGGC TCGATTACCC ACACCAATAA CGAGTATCAA
CCTTGGTGGC AAGTGGATCT AGGCTCAGTT AGATCTATCG ACCAAGTTAA CTTGTGGAAT
CGTACCAACT GCTGCAGCTC GCGTTTATCG GCGTTTTATG TGTTGGTGTC CGATGTGCCC
TTTACATCGC AAACCTTAAG CGGTGCGCTT AGTCAAGCGG GTGTAAGTGC TTATTATTTT
AATGATACTG CGGGCAGCCC AACCGAAATA AATATAGATC GCACAGGTCG CTATGTGCGT
GTACAACTTT CTGGCACAAA CCCATTAAGC CTAGCGGAAG TTGAAGTTAT TGAAGGCAGC
GAAATTGTTC CACCAGCACC AACCGGCCCA GATGCATCAT GGACTTATTG TGCCGCCGAG
CGCGAGCAAT GTGCATTTTC TAATATAAAA GAAGTGGCCT ACGGCGCTGG CGATAGCTGG
AACTACTCTG TCGAGCTAGA CGGCGTAACT TGTAATAATA CTAACTTGGG TGACCCCGTT
CGCGGCACGG TTAAATCGTG CTGGGTACGC AACGCACAAC AAAATTATGT GGCGGTGCGA
AACCTTGCTG AATTGCAAAA TGCTATTTCC AATAGCAATC AACACATTCG CATGAAGCGC
GGTGTGTATG AAGCTACAGC GTTAATGTCT GATAACACCA CCGTATTTCG ATTCGACGGT
GCGAATAATG TATTGGATTT TACCGGTGTA ACCATTCAGG TACCCACTAA ACTCTTAAAC
AGTATGAGTA CCCAGCCTAT TCACTCGCAA GTAACCTACG ATGTGATGGG CGATAACATT
ACTTTTTTAA ACGGTACTTT CGAAAATACC TATCCGAATG GCCAGCACGA TGTAACAGAT
TTTACCGCCC ATAATAAAAA CCCAGACTAT TGGCCCGCGC GTCAAATGAC GGAGTTTAGA
GTGTGGGGGA ACGGCGTACA GTTTTTAAAT AACACCATTA CTGTGCGCGG TTCATACCCG
TATGGCTACG GTGATATGTT AGGTAAGGGC GCCGGTTCTG CAGTGTATTT ACGCAAACAT
GCTGGTGTAC AAATTTCTGG CGACAATGTA TTAATTGACG GCATGAAATT AACCGTACTT
GCATTCGGCC ACGGCATTTT TATGCAGGGT GCAGATAACA CAGTAATTAA AAACTCTGTT
GTACAAGGGC GTATGCGCTT AGGCGCCGAT ATGTATAACG ACGGGCCAGA CTCCTTAATG
GGGCCGTTTA ATTTTGAGCA GCAATACCCA GATCACTTTG TGGGCCTGCC AATTGTGCGC
GACCTAATGT ACAACCTTAC CGAAGATGGC ATACGCGCTT ATACACAAGG CACCAAATTA
GATGGTAGTG TGGTGCGTAC TGGTGCAATT ACTGTAGAAG ACACCAAAGT AATTAATATG
CGCGGTTGTA TTACTACGCC ATTGGCTTCT AAGCCAAGTT ATATAAAAAA TGTAGAAATT
CAAGGTTGTA GTGTGGGTTA CGCGCTGGCG AATAATAGCG ATGTAATCAA TTCGCGCGGT
GATGCAGGCT ACGGTCCGCT ATTGCACTCT ACGTACGATA CGCGCAACAA CGCCAATGTC
GAAATAACCG TTACCAATAT TCCATCTACC GGCTCACACG CTTTTGCGTA TATTGCAGGC
TCTGGTCATA ACATTACCTT CCTAAGTGAT GGCAGCAACC CAGATGTGCC GCGCGAAATA
CGCGTAGGCG ATACTGGCGA CCGCTGGGCT GGCGACCCAA GCTATCAAGA TGCAGCAAAT
ATATTACTCA TAAACGAAAC CAACCAACCG GTGGTGTTAA CTGAAACCAG TAGAAATATT
ACTGGTGAAA GTGTGGGTGA GGTGACTGAT AATGGGACGG GAAATAGCTT GAAATAG
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| Protein sequence | MIKLSHLKHC RKFCISLLCA LGMANAHAAL NVTASADDGN VPANTLDDNI DTRWSANGSG
QWIEYDLGAT HTVDAVQIAF FRGDVRDATI DIQVSNDGGN WQTLFSGTPP TRTLAQQHFE
LDDTSARYVR IVGYGNSQNN WNSITEFDVV TLASGENIAL GKATSQSSTG YEGVSSRAVD
GNTNGNWNQG SITHTNNEYQ PWWQVDLGSV RSIDQVNLWN RTNCCSSRLS AFYVLVSDVP
FTSQTLSGAL SQAGVSAYYF NDTAGSPTEI NIDRTGRYVR VQLSGTNPLS LAEVEVIEGS
EIVPPAPTGP DASWTYCAAE REQCAFSNIK EVAYGAGDSW NYSVELDGVT CNNTNLGDPV
RGTVKSCWVR NAQQNYVAVR NLAELQNAIS NSNQHIRMKR GVYEATALMS DNTTVFRFDG
ANNVLDFTGV TIQVPTKLLN SMSTQPIHSQ VTYDVMGDNI TFLNGTFENT YPNGQHDVTD
FTAHNKNPDY WPARQMTEFR VWGNGVQFLN NTITVRGSYP YGYGDMLGKG AGSAVYLRKH
AGVQISGDNV LIDGMKLTVL AFGHGIFMQG ADNTVIKNSV VQGRMRLGAD MYNDGPDSLM
GPFNFEQQYP DHFVGLPIVR DLMYNLTEDG IRAYTQGTKL DGSVVRTGAI TVEDTKVINM
RGCITTPLAS KPSYIKNVEI QGCSVGYALA NNSDVINSRG DAGYGPLLHS TYDTRNNANV
EITVTNIPST GSHAFAYIAG SGHNITFLSD GSNPDVPREI RVGDTGDRWA GDPSYQDAAN
ILLINETNQP VVLTETSRNI TGESVGEVTD NGTGNSLK
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