Gene Sde_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3702 
Symbol 
ID3966698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4687187 
End bp4687921 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID637922799 
Producthypothetical protein 
Protein accessionYP_529169 
Protein GI90023342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.257264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.155878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCC CAGCACGAGC AAAACGCTCA ACCCTTATCG CCATAGGTGG CTTAGCCCTT 
GGGCTAACAG CCTGCGGTGG CAGCGACAAG AAAACTATGG ACCCAGAAAT GATGCCCGAG
CCAGTAATGG CCAGCTACGA GGTTACCATC ACCAACGTCA CCCACGGCCA GCCTTTATCG
CCACCCGCTT TGTTTTTGCA CACTTCGGAT GTTAAAAGCT GGATGACCGG CAGTAGCGCG
TCACAAGGCT TAGAGGTTTT AGCCGAATCG GGTAGTACTG CAGAGCTATT AGCTGCAACC
AGCACAATTA ACGCCGTTAG CGGGGATTCG GTAATCATAC CCGGCGACCG TGCAACCTAT
ACCCTTATGG CAGAGCTAGC TGCAGAGGGT GAAAACGACA TTGAACTCAC CGTTGTAAGC
ATGCTGGTGA ACACAAACGA CGCGTTTACC GGTGTGCAAA ATTGGCATGT GGGCGAAATG
GAAGTAATGG ATGAAATGAA AGCGCTCGCC CCCGTATACG ACGCCGGCAC AGAAGCCAAT
GTAGAAACCC AAGCGACCAT TCCCGGCCCT GCCGCGGGTG GCGAAGGCTA CAACATGGAA
CGCATGGATA CCGATAAGGT AAGCATGCAC CCAGGCGTAG TAACCCAAGC AGACGGCTAT
GCCGAGTCCG CGCTTACACA AGCCCATAAG TTTGATAATG GCGCCATGGT AGTAGTGGTT
AAACGCGTAC AATAA
 
Protein sequence
MQFPARAKRS TLIAIGGLAL GLTACGGSDK KTMDPEMMPE PVMASYEVTI TNVTHGQPLS 
PPALFLHTSD VKSWMTGSSA SQGLEVLAES GSTAELLAAT STINAVSGDS VIIPGDRATY
TLMAELAAEG ENDIELTVVS MLVNTNDAFT GVQNWHVGEM EVMDEMKALA PVYDAGTEAN
VETQATIPGP AAGGEGYNME RMDTDKVSMH PGVVTQADGY AESALTQAHK FDNGAMVVVV
KRVQ