| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3693 |
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| Symbol | |
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| ID | 3966689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4678408 |
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| End bp | 4679838 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922790 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_529160 |
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| Protein GI | 90023333 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.963643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0549661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATAT TGGTTAGGTT AGGATTTAGG CATAGTGTAC CGTTTATATT GGCTTACCTC
GCATTAGCAG GGGCGAGTAT GCTGCTAGCT GTTGCCCCAA GTAATGTCAC ACCCCTATAC
CCTGCCGCAG GGCTAGCTTG GGGGGTAGCC ATTCTCTGGG GACGCCGCAC TTACCCCTCC
ATATTTGTTG CTGCTACCCT CGCAAATACC CTACCTTTAC TATTCAGTCA GCCTAGCTTT
GCTGCAGTAC TAGCCGGTAT AGCCATTGGT GTGGGTGAGG TTATAGCTGT ATTAATAAGT
TGCAAGCTGT TAAGTGCTGT GCGCGGCCGC GAGCGAGTAT TTAAGCAAGT GCAAGATGTC
ATTGCGTTCT CTGTAATTGC ATTATTTTGG GTGGTGAGCC CTACAATTGG CGTAAGTGCG
CTCGCTTTAG CTGGGCTTGT AGAAAGCGGA GCGTTTTCGC GAGTATGGTT AACCTGGTGG
CTGGGCGATT CGATAGGCAT ATTGCTGCTT ACGCCATTGG TATTAATAGT AAATATCACT
CACTGGCGCA ACCTGTTAAA TAACGATGGC TACAAGCTTG TGGTAGGCAT TGTAGGGGCC
GCTACAGCTA GCTTGGCAGT GTATGCATCC GGTTTACCGT TGTTGTATTT GCTTACCGGC
ATATGTTTTA TGGCCGCTTA TAGGCTAAGT CTTTTTGGTG TAATTGTGGT TAACTTGGTT
ATTGCTACTA TTACCTCTTC TGCCTATATG TGGCAGGTTG GCCCGGGTGC GCATTTTGCC
GCGCCAATTC AATTAGGGTT AATTCAGTTG TTTCTTGCCT TTAACATGGT TATCTCGCTG
GTATTTTGGT GCACCCAAAG CCGAAACCGA GAGCTAAGTG TTAAATGGAG TAGGGCAGAA
ACACAGGCGC GGCTAGACCC CCTTACTAAA ATATATAACC GTCGCGGGTT TGAAGAGCGC
GCCATTCAGC TAATGAGGCA AAAGCGCACA CTGTCGCTGC TAATTTTAGA TATAGACCAT
TTTAAATATG TAAATGATCA CTATGGCCAC GATATTGGCG ACGAAGTGTT GCGCCAATTT
TCTAAAAAAA TTGCAGGCAT GATTCGCGAT AGTGATGTGT TTGCGCGCAT AGGGGGCGAG
GAGTTCGCCG TTATTTTGGC CGATCAAAAC CTAGAGCTTG CCGGGCTAAT GGCAGAACGC
ATTCGCGCTA CTATCGAATC CACCGAGCTG CCTGTCAGTT CCGATAATAC AATCAAATAT
ACAGTTAGTA TTGGGGTTAG CTCCGTTTCA GAAGGTGTAG ATATTCACCG CTGGCTAAAA
ACTACCGATA AACTGCTTTA TCAAGCTAAG GCGCAAGGCC GCAATCAAGT GGCTGCGGGT
TGCGTTGTGC CCATAGACGT TGCTCCTACA CCTTCTCGAA AAGTAAATTA G
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| Protein sequence | MGILVRLGFR HSVPFILAYL ALAGASMLLA VAPSNVTPLY PAAGLAWGVA ILWGRRTYPS
IFVAATLANT LPLLFSQPSF AAVLAGIAIG VGEVIAVLIS CKLLSAVRGR ERVFKQVQDV
IAFSVIALFW VVSPTIGVSA LALAGLVESG AFSRVWLTWW LGDSIGILLL TPLVLIVNIT
HWRNLLNNDG YKLVVGIVGA ATASLAVYAS GLPLLYLLTG ICFMAAYRLS LFGVIVVNLV
IATITSSAYM WQVGPGAHFA APIQLGLIQL FLAFNMVISL VFWCTQSRNR ELSVKWSRAE
TQARLDPLTK IYNRRGFEER AIQLMRQKRT LSLLILDIDH FKYVNDHYGH DIGDEVLRQF
SKKIAGMIRD SDVFARIGGE EFAVILADQN LELAGLMAER IRATIESTEL PVSSDNTIKY
TVSIGVSSVS EGVDIHRWLK TTDKLLYQAK AQGRNQVAAG CVVPIDVAPT PSRKVN
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