| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3623 |
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| Symbol | nudE |
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| ID | 3966580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4596715 |
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| End bp | 4597263 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922720 |
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| Product | ADP-ribose diphosphatase NudE |
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| Protein accession | YP_529090 |
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| Protein GI | 90023263 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.50121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTCTC TTCCCAAAAT ACTGCAGTGC CAGCAGGTAG CGCAGAGTAA ATTATTCCGT
GTAGAGCAAT TGCAATTACA GTTTAGCAAC GGCGAACAGC GCACCTACGA GCGCTTGGCT
GGGGGTAAAA CCGCAGCAGT AATTATTGTG CCTATGCTAG ATAACGACAC AGTACTGCTA
ATTCGCGAAT ACGGTGTAGG GGTAGAGGGC TACGAGCTGG GCTTACCCAA GGGTAAAGTA
GATGCAGGCG AAACCCATAT GGAAGCTGCC AACAGAGAAT TAAAAGAAGA AGTGGGTTAC
GGCGCGAAAG ATTTACAACT AATGAAATGC CTAAGCCAAA GCCCCAATTA CATGCAGCAC
AAAACCCAAA TAGTGCTGGC GCGCAATTTA TATCCAGAGC GGCTAGAGGG CGACGAGCCA
GAGCCGCTAG ATGTGGTGCC CGCAAAATTA AGCGAGTTAG AGCAATGGAT AGCTCGAGAC
GACCTCACCG AGGCGCGATC CATTGCTGCG TTACTTCTAG CAAGGCAGTA TCTTCAAGAC
CTCAAATAA
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| Protein sequence | MPSLPKILQC QQVAQSKLFR VEQLQLQFSN GEQRTYERLA GGKTAAVIIV PMLDNDTVLL
IREYGVGVEG YELGLPKGKV DAGETHMEAA NRELKEEVGY GAKDLQLMKC LSQSPNYMQH
KTQIVLARNL YPERLEGDEP EPLDVVPAKL SELEQWIARD DLTEARSIAA LLLARQYLQD
LK
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