| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3618 |
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| Symbol | |
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| ID | 3966575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4590155 |
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| End bp | 4592647 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637922715 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_529085 |
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| Protein GI | 90023258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4928] Predicted P-loop ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.387409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.12655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACAA ATAGGAAATA TAGAGAGAAA ATCCAAGAGC TAACAAAAGA AACGAAGAAT
GATCGGCTTG AGGCAATGCT GTATGCAAGG TTTTTGCTGC GGATGCTAAT TATTGTTGGT
GCCGTTGTCA GAAATTCAAA ATGTTGGACA GTATCTGGAA TTGAGCGCTG GGAAAGCGTT
TCGAATAGTT CAGAAAATGA AGATAAAGGA GAGCGAATTT TAGGGTACAG CCTTCATGAT
TTTAAAAAAC TAACAGATGA TGAAAGATTC TATATAGGTA TTCAATATAT TGTAAAGAGT
ATCTTAGATG TCTTATCGAG CGAAGCGTCG GAATCTTCTG TTATTGATTT AGACCGTTTG
TCTGCCATTG CTATGGAGTC TGATACCGCG CATGAAGATA CGAATGGTCT GTCTCATTTT
GTTTTTAGAT TAGCTGAGCA AGTGGTTAAA TTGACGCGAT TTAGTAGTGA TCCAAATTAT
CAAAAATCAT CTTTGATAGA AGACGATACC TGTTTTATAA AAAACGTTGA TGGAATTGTT
AGTGGACCTT TCGATGCATG CTGTTTCGAA AAAATTCAGA GGGATATCGA TCTAGTTAGA
CAAAAAGGAG GGGATGAACT ACAGCGAGCT CCTCTTTGGG ATGTCGGTGA TTTGGATAAC
CCTGACTTTA TTCATTGGCG ATCTAATTTC GTGACTACTT TTGAGGATCT TGAGTTGAAA
CTCGAGGAGA GTGGATCGTC TGTATTCTCA AGTAGCGATA AAGGTTTATA CAAATCGTTG
GTGGATGGAG AAGCGTTGGC AAGGATGATC AGTGCGACCT CCTATGTTTC GGCAGAAAAT
AAGGAAGTGA TAAAAGATAG TTTAGCTAGA GATAGGTATG TTTCAGCATT GGCCAAAATA
ATAAAGAATA AGCGTAATGA CTGGAATATC TGTATTGGTC TGTTCGCCAG GTGGGGAGAC
GGAAAAACGG GTTTATTAAG TCTACTTAGC AAAAACTTAA GAAATAATAG CACTGATAAA
AATAAATGTT ATATCGCGAA CTTTAATGCA TGGGCTTATC AGGGAGCTGA GAGTGTCAGA
GCAGCGATGG CGCATGAGAT TGTTAAGACA CTAACTACTA AGTATTATCG TGAATATGCT
AATGAAGATC ACGCAGAAAG GAATTGGTTT ATGATCTCTA TTGAAAAGGT TTTTGGCTTT
GTTGTGGAGA TAAGAGGTGT ATTTACTAAT CTTGTTTGTC GTTTTATTTT AGCTATTAAG
TTTACTCGAA GAAAATCCAT TTTAAAACTT ATGGCTACAT CTATAGTGGT AGTCCTAAGT
GCACCATTTG TATATTCTGG ACTATCCGAT TTTATCGCTA GCTTTTTTAA GGACTGGAGA
CTTATAAACC CTTCCGATGT AAATTATTTG GCGGCAGTAG AGGCGTCAAT TGGTGTGCTT
GTATCAGTAA TTAGCCTGCT TCCTCACCGA AAAGTATTGG CTCAGCTGTA TACTTCTGAG
CTTCGCACTT ATTTGGAATT GCCAAGTTAT GCTAAGGATA TTGGCGATGT GCCTCAGATG
AGTCAAGATC TTAAAATACT ATGCGGTATA CAGTTAGGAG CAGGAGCGCG CGAAAAATAT
ACTAGGCGAA TGGTGGTCAT TGTTGATGAT CTTGATCGTT GTGAACCAGA TTGTATTGTG
AAAGTATTTG AAGCTATAAA GCTGGTGATG GATATACCGA ATGTTATAGT AATTATTTCA
ATGGATCATA GGATAGCACT ATCTGCATTG TCAGAAAATT ATCAATCAAT AGAGAGCTAT
CATGAGTTAG GTTGCGCTAG AAGTATTGCA AGAGATTATT TGGGGAAAAT AATTAATTAT
TCAATTTGTT TGCCACCTTT GTCGAGCGAT AATGTTAAGG CGTATATTGC GCATTTAATA
GAAGAAAGTG CAGCAGAAAC TTTGAACAGC CAGTCAATAA GCGCAAATGG TAGGGCAAAA
GAGACCAATG TACAGCCAGA AGCCGAACAG GACCAATCTG GTGCTAGCCA AAAGAGGAGT
GAAAAGGATA AACAAAAGAA TGAGAGCAAG AAGTTGGAAG AAAAGTCTTC TGAGGTTGAG
TTCGTGGATA GAGATATTCA GCGCAGCCTA GCTGATTGGG CTATTAAGTT GGGTATCAAT
AATCCACGCC AGATAAAGAG ATTGTACAAT AGTTATCACA TGATGATTAA CATCTATCCT
GGGGAGCAGA TAGGGCCGAA AGACGACGGT GCCCACACAA ATTTAGCTCT ATTGGCTTTG
ATGCTTGTCG AAAAAGTGAA TAGCGAGTCG AGCAGTAAAG TGAGATCAGA GCTTTGGAAA
TATTTATGTG ATGGGCCTAC TGTAAGACTG CCTTCAGTAG ATGGCGATTC GGACCTAGAA
GAGGTCATTA AAATCTTTCA TGGAGAAATT AATGGAGCTA AACGAGAAGA AATTCTTGCA
AAGGCTAGCC AGTTTGTTCT CCCCTATTGC TAG
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| Protein sequence | MYTNRKYREK IQELTKETKN DRLEAMLYAR FLLRMLIIVG AVVRNSKCWT VSGIERWESV
SNSSENEDKG ERILGYSLHD FKKLTDDERF YIGIQYIVKS ILDVLSSEAS ESSVIDLDRL
SAIAMESDTA HEDTNGLSHF VFRLAEQVVK LTRFSSDPNY QKSSLIEDDT CFIKNVDGIV
SGPFDACCFE KIQRDIDLVR QKGGDELQRA PLWDVGDLDN PDFIHWRSNF VTTFEDLELK
LEESGSSVFS SSDKGLYKSL VDGEALARMI SATSYVSAEN KEVIKDSLAR DRYVSALAKI
IKNKRNDWNI CIGLFARWGD GKTGLLSLLS KNLRNNSTDK NKCYIANFNA WAYQGAESVR
AAMAHEIVKT LTTKYYREYA NEDHAERNWF MISIEKVFGF VVEIRGVFTN LVCRFILAIK
FTRRKSILKL MATSIVVVLS APFVYSGLSD FIASFFKDWR LINPSDVNYL AAVEASIGVL
VSVISLLPHR KVLAQLYTSE LRTYLELPSY AKDIGDVPQM SQDLKILCGI QLGAGAREKY
TRRMVVIVDD LDRCEPDCIV KVFEAIKLVM DIPNVIVIIS MDHRIALSAL SENYQSIESY
HELGCARSIA RDYLGKIINY SICLPPLSSD NVKAYIAHLI EESAAETLNS QSISANGRAK
ETNVQPEAEQ DQSGASQKRS EKDKQKNESK KLEEKSSEVE FVDRDIQRSL ADWAIKLGIN
NPRQIKRLYN SYHMMINIYP GEQIGPKDDG AHTNLALLAL MLVEKVNSES SSKVRSELWK
YLCDGPTVRL PSVDGDSDLE EVIKIFHGEI NGAKREEILA KASQFVLPYC
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