| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3613 |
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| Symbol | |
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| ID | 3966570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4583854 |
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| End bp | 4585011 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637922710 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_529080 |
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| Protein GI | 90023253 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.350742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0515113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCC CACATACTAA GACCATAGTG TTTGTACTAT TGATAAGCAG TTCTATCGTG
GGGGCTGGGC TGAGCTTTTG GCTGGCTACT ACACAGCATT CACTGCTTCC TGCACCGCGA
AGCCAGCATC AATGGACTGC GCGTACCATT AGTGATAGCG AAATGGGAGG GGCGTCGCAC
ATTGCTCTAA AGGACAGCGA TTACGCTTTA GATTTCGACT ACCAAATCAC ACCACAGCTG
GCTTACCCCT ATGTTATTTC TGTGCTGGAT TTCGATCACA AGGAGCAAGC TAGTTCTTAT
GTAGACCTTA GTCATTATCA AACGGTGTCA TTCGATATTA AGTGTCAGCA CACAAATATG
CTCTCTTTTA ATGTGGCTAC TTTCGATGCC ACCGTAACAA AACCTAGCGA GTTTCCCACG
TTTAAAATTG TGAGCCATTT ATTTAACTGC GAAAATAAAT GGCAAACTAT TGAAGTGGAT
TTACATCATA TTCCAGCCCC AAGGTGGTGG TTAGAAAGTT TTAATATGCC GCTTTCGGAT
CAAAGCTACA ATCTTAAAAA AACACGCGCT CTTACCTTTG GGGCTTCTCG ACACGGTCCA
ATGAACTTGG TAACTAACGT TAAGGTTAGT CAGTTACAAC TAAATGGGTT TAAATGGCCT
GTCATTTACG CATACATTGT TATATTGGTT GTTGGTTGGC TTGTATATGC TGTTTGGGCC
CTGCGTGGTT TTGTTCGCCG TATTCGCCAG AATACATTAC CTAGTCATGT TGGCCTGCCA
CAAGCTGTGG AATTACTGCC TTACAGAGCG AAGGAAAAAC AGCAGCTCAT TACATTTTTA
GATGCCCAGT ACCGCAATGG CGAACTTAGC TTAGCGTACA CTGCAAGTAC TTTGGGGATT
AATAGAAATA AAGTGAATGA TATTTTAAAA CAGGAATTTG GCCAAACCTT CAGCAGTTAT
TTAAACTGGT TGCGTTTAGA CGAAGCCGCT AGATTGCTAA GCAGTAATGA TAATGTCAAC
ATTTCGGAAG TGGCCTTGTA TGTTGGTTAC AAAAATGTGT CGTATTTCAA TAGGCTATTT
AAAGAAACCT ATCAGTGCAC GCCAAAAGTG TATAAAACTA AACATATAAA AGCTCAGTCG
ACTATTTCAC AGCTTTAG
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| Protein sequence | MRSPHTKTIV FVLLISSSIV GAGLSFWLAT TQHSLLPAPR SQHQWTARTI SDSEMGGASH
IALKDSDYAL DFDYQITPQL AYPYVISVLD FDHKEQASSY VDLSHYQTVS FDIKCQHTNM
LSFNVATFDA TVTKPSEFPT FKIVSHLFNC ENKWQTIEVD LHHIPAPRWW LESFNMPLSD
QSYNLKKTRA LTFGASRHGP MNLVTNVKVS QLQLNGFKWP VIYAYIVILV VGWLVYAVWA
LRGFVRRIRQ NTLPSHVGLP QAVELLPYRA KEKQQLITFL DAQYRNGELS LAYTASTLGI
NRNKVNDILK QEFGQTFSSY LNWLRLDEAA RLLSSNDNVN ISEVALYVGY KNVSYFNRLF
KETYQCTPKV YKTKHIKAQS TISQL
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