| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3575 |
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| Symbol | |
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| ID | 3966437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4534966 |
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| End bp | 4535340 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637922672 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_529042 |
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| Protein GI | 90023215 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.607057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTAT CGCGCAAACT TAAAGGTTTT ACCCTTATCG AAGTGCTTGT GGCGCTTGTG
GTAATAGGTA TGGCGCTGCC TGCTCTAGCT CTGCGTTTTC AATCCATGCT CGACCATACC
GGTCGCATGG AACAAAAAAA TTATGCCTAC TGGATAGCGC AAAACAAATT AAATGAAATT
CAGTTGGAGC GCAATTTAAA GGGCGCATTT ACCAAGATTA AAAAGACCGA CGAAATAGAG
TACGGCGGAA GAGAGTGGGT CTACTCCATT GAGACTATCG ATACCGAAGT AAAAGGTATC
TACCGCATTG AAGTAAGTGT TGGTGAAGCC AAAGATCAAT GGTTGGCGAG CTTGGCTGGG
TTTATAAGTG AATAA
|
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| Protein sequence | MMLSRKLKGF TLIEVLVALV VIGMALPALA LRFQSMLDHT GRMEQKNYAY WIAQNKLNEI
QLERNLKGAF TKIKKTDEIE YGGREWVYSI ETIDTEVKGI YRIEVSVGEA KDQWLASLAG
FISE
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