| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3527 |
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| Symbol | |
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| ID | 3966369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4480780 |
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| End bp | 4482111 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922624 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_528994 |
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| Protein GI | 90023167 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.755877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA AGTTTACCGA AGGCGCTATC TTTTCACATA TTTGTACCAT GACATTCACC
TCTATGGCGG GTTTGCTGTC GCTGTTTTTA GTCGATTTGG TCGATATGTA CTGGCTTAGC
TTACTGGGTG AAATTGAATT GGCCGCCGCC ATCGGTTACG CGGGGTCGAT TTTATTTTTT
ACGTTAAGTT TCTCTATTGG TTTATCTATT GGCTGCGCGG CGGTTGTTTC TCACGCAATT
GGCGATGGCG ATAAACACGT TACTCGCGAA CTTGTAGGCA ATGTACTACT CACCATCACT
CTCACCACCT CGCTGCTGGC GCTATTAGTT GTATCGTATG TGTCGCCATT ACTCGAAGGG
CTTGGTGCAC AGGGGCGAGC GTTTGAGCTT GCTCACGATT ACCTCGTTAT TATTTTGCCT
AGCATGCCTT TACTCGCTAT TGCCATGGCA TGCGGCGGAG TATTGCGCGC GTTAGGCAGC
GCTAAAGAGG CCATGTTTCT CACGCTTTTG GGAGGCTTTG TGAATGCTGT GCTCGACCCG
ATTTTTATAT TTGCTGTGGG TTGGGGTATA GAAGGCGCTG CAGTGGCCTC GGTACTAGCA
CGTGTGGCGA TGGTGGCTTA CGGCTTGCAC AAAATTATTG TGCACTACGC CTTACTTGCC
ATGCCGAATT GGACAACCCT TGTGCGTGAT TTTAAAAATT ATTTCGCCAC CGCCTTCCCC
GCAGTGTTAA CCAATTTGGC CACCCCAATA GGGGTAGCGT TTGTCACTGC CACAATGGCC
CAGTTTGGCG ATAGCGCCGT GGCAGGCAAT GCAATATTGG GCAAATTACA GCCCTTGGCG
TTTGCCGGTT TGTTCGCGCT GTCGGCATCA GTTGGCCCTA TAGCTGGGCA AAACCTAGGC
GCTAAGCAAT ACGACCGCAT AATGGAAACC CTAACAGGCA GTATTCGTTT TATTACACTG
TATTCACTCG TTGCCTGCCT CGCATTGGCA TTGCTTGCTA AATTGATTGT GTACGCTTTT
CAAGCTAGTG GCGATGCAGA AAAATTAATC CTGTGGTTTT GCTACGGCTT AAGCGCTATG
TTCTTTTTTA ATGGCATTAC TTTTTTAACC AACGCATTGT TTAACAATTT AAAAGCCGCC
CAATATGCCA CCTTCTTTAA CTTTCTTCGC GCCACCGTAT TCACCATGCC ATTCGCGCTA
CTCGGCGCAA AATGGGGCGG GCCCGTGGGA ATATATGTGG GGTTGTTTGT AGGGGCTGCG
CTAGTAGCAG GGTTGGGGCT GTGGGTGGCT TATCGGAAGA TAGATAGGTT ACAGCTTACG
GTTGAGAGTT AA
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| Protein sequence | MKAKFTEGAI FSHICTMTFT SMAGLLSLFL VDLVDMYWLS LLGEIELAAA IGYAGSILFF
TLSFSIGLSI GCAAVVSHAI GDGDKHVTRE LVGNVLLTIT LTTSLLALLV VSYVSPLLEG
LGAQGRAFEL AHDYLVIILP SMPLLAIAMA CGGVLRALGS AKEAMFLTLL GGFVNAVLDP
IFIFAVGWGI EGAAVASVLA RVAMVAYGLH KIIVHYALLA MPNWTTLVRD FKNYFATAFP
AVLTNLATPI GVAFVTATMA QFGDSAVAGN AILGKLQPLA FAGLFALSAS VGPIAGQNLG
AKQYDRIMET LTGSIRFITL YSLVACLALA LLAKLIVYAF QASGDAEKLI LWFCYGLSAM
FFFNGITFLT NALFNNLKAA QYATFFNFLR ATVFTMPFAL LGAKWGGPVG IYVGLFVGAA
LVAGLGLWVA YRKIDRLQLT VES
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