Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3501 |
Symbol | |
ID | 3966343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4456960 |
End bp | 4457358 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922598 |
Product | hypothetical protein |
Protein accession | YP_528968 |
Protein GI | 90023141 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.987985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.527016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAA TGATAAACCC GCCAACTCGC CATAACCCCA GCGGGTATAC CCACGGCGTG ATCGTGCCAG AAGGAAAGCG CATGATGTTT ATATCTGGTC AGTTGTCTGG CAACGTGCAC GGCGTATTGG AAAGCGATGA TCTTGTTAAT CAGTTTTCAT CTTGCCTAGA TAATGTGCTT AAGGTTGTTG AGGCAGCAGG AGGGGGAGCA AAGAATATTG CAAAAATGAA AGTATTTATA ACTGATTTCC CAGAGTATCA TCGACGCAAA ACTGAAATAG CTGTTGCGTG GCACGCTCGC TTCGGTGAAG GGTTTCCCTC CATGACTATT ATTGATGTGA AGCAATTGTT TGATTCAAAG GGCAAGGTGG AAATAGAAGC TGTCGCCTTT GTTGACTAG
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Protein sequence | MFEMINPPTR HNPSGYTHGV IVPEGKRMMF ISGQLSGNVH GVLESDDLVN QFSSCLDNVL KVVEAAGGGA KNIAKMKVFI TDFPEYHRRK TEIAVAWHAR FGEGFPSMTI IDVKQLFDSK GKVEIEAVAF VD
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