Gene Sde_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3501 
Symbol 
ID3966343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4456960 
End bp4457358 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID637922598 
Producthypothetical protein 
Protein accessionYP_528968 
Protein GI90023141 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.987985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.527016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAA TGATAAACCC GCCAACTCGC CATAACCCCA GCGGGTATAC CCACGGCGTG 
ATCGTGCCAG AAGGAAAGCG CATGATGTTT ATATCTGGTC AGTTGTCTGG CAACGTGCAC
GGCGTATTGG AAAGCGATGA TCTTGTTAAT CAGTTTTCAT CTTGCCTAGA TAATGTGCTT
AAGGTTGTTG AGGCAGCAGG AGGGGGAGCA AAGAATATTG CAAAAATGAA AGTATTTATA
ACTGATTTCC CAGAGTATCA TCGACGCAAA ACTGAAATAG CTGTTGCGTG GCACGCTCGC
TTCGGTGAAG GGTTTCCCTC CATGACTATT ATTGATGTGA AGCAATTGTT TGATTCAAAG
GGCAAGGTGG AAATAGAAGC TGTCGCCTTT GTTGACTAG
 
Protein sequence
MFEMINPPTR HNPSGYTHGV IVPEGKRMMF ISGQLSGNVH GVLESDDLVN QFSSCLDNVL 
KVVEAAGGGA KNIAKMKVFI TDFPEYHRRK TEIAVAWHAR FGEGFPSMTI IDVKQLFDSK
GKVEIEAVAF VD