| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3493 |
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| Symbol | |
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| ID | 3966335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4448057 |
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| End bp | 4449628 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922590 |
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| Product | hypothetical protein |
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| Protein accession | YP_528960 |
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| Protein GI | 90023133 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0647541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC TGGCCCAACG CATTATTCAC TGGGCCGCAG TACAGCCAGA AAAACTGGCT
GTAGACGACG GCACCCAAGC GATAACCTAT AAAGAATTAG CGCATCAAGC AGGCTCTCTC
GCGGCACGTT TGCAAAGCAA CGGCGTGACT AGCGGCGACC GCGTAGTACT TCTTTTACCC
AAAAGCACAA CTGCAGTATG CGCTATTATA GCTGTGCTCT CGCTGGGTGC TGCGTATATT
CCAGCAGACC CAGATGCGCC CAAGCAGCGC TTGCAAAGCA TTGTAGATGA CAGCGAACCC
AAAGCGATTA TTTGCAGCAA CCATACCGCT GATTGGTTTA ATACCCTGTG CACTATAAAT
ATTGACGCGA GTATTGATGC TTTTACTGAC AACGCACAAG CGCACTTAAC CTCGCTTGAA
GGTAATGCAG AGCACGACGC CTATATACTT TATACTTCTG GGTCTACAGG TGTACCTAAC
GGCGTACGCA TTAGCCATCG CGCTATGTTG GCATTTTTCC AAGCAGTTAA CACCTACATG
GGGGTTAATC AACAATCGCG CTGCATGAAT ACATCTGCAC TGTATTTTGA TGTCTCTATC
GCAGATTTAC TTTTGCCCCT TTACATGGGC GCCTCCGTTT GGCTAGGACC TACTGTACCT
TTACCGTTTA GATTTATAGG CTTAATAACC AACCAGAAAA TAACTCACTT TTGCGCCGTG
GGCTCAACAC TTACCATGCT GGCCGCGCTG CCAAATTTCG ACAAAAATAA CTGGCCACAC
TTACAAACCA TTATGACCGG TGCCGAGGTA TTAAACCCCA ACACCATTAA CGCCTGGCTA
AATTGCAGCC CTAACGCTAC CGTTTTAAAT GGCTACGGCC CCACCGAAAC CACCTGTGTT
TGCACGCTGT TTCAAATAAA TCACGAAAAT ATTCACCAGT ACTCGAGCTT CCCTATAGGT
GTACCACTGC CATTAGTGGA TGCCATTATT GAAATAAATA GTGATAAAAA TAGTGATGAA
AAAAGCGATG AACCTGGTAT AGGTGAACTG TGCATTGGCG GCCCACAAGT AATGAATGGT
TACCTTAATC GAGAGCTTTT AAATGACGCT CGACTTACGC GAATTAACCA CGCCACATAT
TACCGCACCG GCGACAAAGT GCGCCGCGAC CACAATGGTA ATTTAATATT TTTGGGCCGA
ATAGATGATC AGGTAAAAGT AAATAGTTAT CGCGTGGACC TAGGCGATAT AGCTGAACCC
TTTCGCAGCC AAAGTATTGT TCAAGATGCC GTTGCGCTGG TAGTTAAGCA CACTACTTAT
GGCGAGTGCC TTGCTGTGGT TGTTAAAACA CGTAACGAAG GCGAAAACCT AGAAAGCTTG
CTAAACCAAG CAGCACAGGC CCTACCGCAC TATATGCGCC CTGCGCTTAT TGCCAGCATA
GACGCAATGC CGTTAAGCCC CAGCGGTAAA GTTAACGCTA AAAAAGTGCG CGCATTGGCT
AACCAACACT TTCTAGAATG CAACGAACGC TATAGCCATA TTTCAGCTCA CATAGAGGAG
CACGCCCTAT GA
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| Protein sequence | MQTLAQRIIH WAAVQPEKLA VDDGTQAITY KELAHQAGSL AARLQSNGVT SGDRVVLLLP
KSTTAVCAII AVLSLGAAYI PADPDAPKQR LQSIVDDSEP KAIICSNHTA DWFNTLCTIN
IDASIDAFTD NAQAHLTSLE GNAEHDAYIL YTSGSTGVPN GVRISHRAML AFFQAVNTYM
GVNQQSRCMN TSALYFDVSI ADLLLPLYMG ASVWLGPTVP LPFRFIGLIT NQKITHFCAV
GSTLTMLAAL PNFDKNNWPH LQTIMTGAEV LNPNTINAWL NCSPNATVLN GYGPTETTCV
CTLFQINHEN IHQYSSFPIG VPLPLVDAII EINSDKNSDE KSDEPGIGEL CIGGPQVMNG
YLNRELLNDA RLTRINHATY YRTGDKVRRD HNGNLIFLGR IDDQVKVNSY RVDLGDIAEP
FRSQSIVQDA VALVVKHTTY GECLAVVVKT RNEGENLESL LNQAAQALPH YMRPALIASI
DAMPLSPSGK VNAKKVRALA NQHFLECNER YSHISAHIEE HAL
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