| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3488 |
|---|
| Symbol | |
|---|
| ID | 3966330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4442173 |
|---|
| End bp | 4443171 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637922585 |
|---|
| Product | putative aldo/keto reductase |
|---|
| Protein accession | YP_528955 |
|---|
| Protein GI | 90023128 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0487962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAT TATTGGGTAA CAGAGAAGTC CCAGCGGTGG GTTTAGGCTG CATGGGTATG
AGCGAATTTT ACGGCGCGGC GGACGAAGCA ACCTCATTAC AAACATTGAA TGAAGCCTTC
AACCTAGGTT ACCGACATTT CGATACAGCA GACATGTACG GGTTCGGCCA CAACGAAACA
TTGGTTGGCA AGTTTATAAA CCAAGAAAAT ATTAACCGTG AAGAGCTATT TATCAGTACT
AAGGGCGGTA TTGTTAGAGA TGTGAATGAT AAATATAACG TATCGGTTAA CAGCACCGAA
CAATACATTC GCGCTGCATG TGAAGCATCT TTAAAGCGAT TGAATACTGA ATATATTGAC
CTTTACTACC TACACCGCTT GGACCCAGCA ATAGAGTTGG AAGAAAGCAT TGGCACGCTT
AAAGCGCTTG TAAAAGAAGG AAAGATTAAA AATATTGGCC TGTGTGAAGT GTCGGAAGAT
CAACTTGCAA AAGCACATCA AATTCACCCT GTGGCTGCAG TGCAAAGTGA ATTATCGCTT
TGGTCGCGTG ATTCCGAGCT AGGTGTATTG CCTCTTTGTG TTGAGCTTGG TGTGGCATTC
GTAGCATTTA GTCCCTTAGG GCGCGGCTTT TTAAGCGGTA GCATAGATAA AAGCTTTATG
GCGGGCGTAA GTGACGACCT AGATTTTAGA AAGCGCTTGC CTCGTTTTAG CGAAGACAAT
ATTGATTCCA ATATGCAGTT GGTGGAAAAG CTAAAAGGCG TTGCCGAGCG ATTGCAGGCG
CCAGTATCGC AAGTGGCGCT GGCGTGGGTT CTAGCTAAAG CACCTAACGT TCATATTATC
CCTGGTTCCA AAACCCCCAA GTACTTACAA AATAATTTTG ACTCAAGATT ACTTTCGTTA
GAACCGAACG TAGTCGAAGA GCTTAATACT ATTTTCTCGC CAGATGCTGT TGTCGGCTCG
CGCTACCCGC AAAAAATACT TGAAAAGTCA TCCGCCTAA
|
|---|
| Protein sequence | MFRLLGNREV PAVGLGCMGM SEFYGAADEA TSLQTLNEAF NLGYRHFDTA DMYGFGHNET
LVGKFINQEN INREELFIST KGGIVRDVND KYNVSVNSTE QYIRAACEAS LKRLNTEYID
LYYLHRLDPA IELEESIGTL KALVKEGKIK NIGLCEVSED QLAKAHQIHP VAAVQSELSL
WSRDSELGVL PLCVELGVAF VAFSPLGRGF LSGSIDKSFM AGVSDDLDFR KRLPRFSEDN
IDSNMQLVEK LKGVAERLQA PVSQVALAWV LAKAPNVHII PGSKTPKYLQ NNFDSRLLSL
EPNVVEELNT IFSPDAVVGS RYPQKILEKS SA
|
|---|
| |