| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3484 |
|---|
| Symbol | |
|---|
| ID | 3966326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4437634 |
|---|
| End bp | 4438515 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637922581 |
|---|
| Product | alpha/beta fold family hydrolase/acetyltransferase |
|---|
| Protein accession | YP_528951 |
|---|
| Protein GI | 90023124 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.061882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0864315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGT ATGTCAAAGA AATAAACGGA ATTCGCACAG AAATTATTGA ATCGCGCGGC
GTGGGTACAC CTGTGTTTAT TTTTCACGGT AACTCAAGTG GAGCAAGCGC ATATGTCGAT
TTGTTGCAAT CCGAAGTGGG AGATACCTAC AGGCTTATCG CGGTTAGTTT TCCTGGGCAC
GGTGAATCTG CTTACTACCG CGAAGATGTT ACTGAAGTTA CTATTGAGCA GCTTGGCGAG
TTTACCGTTG ATGTAGTAAA TAGCTTTGGC TTTGATAAGT ATGTGCTTAT TGGTCAAAGT
CTTGGTGGTC ATGCTTTATT GGAGTCGCTA CCAGCGCATT CTAATGCGGC TGGATTGGTG
CTTGTGTCTT CGCCACCTAT CGCATTGTCT CGCTTGGGTG ATGCCTTTTT AGCAGACCCA
ACCGATGGTT TGCTGTTTAA AGGTGAATTG AGTGAGCAAG AGTGCGCTCG CTTTGGCAAA
GCCTTTGTGC AAACAGGGTC AATCGATAAG CTACAAGAGC TAGTTACATT AATTGAGTCA
ACCCACCCTC AGTTTCGTGA GCAGCTTGGT GCTGGCTTAG GTGCGGGCAA GGTATTGGAT
GAAGTGGCAT TGCTAAAACA AAGTGATCTA CCTTGTTTAA TGCTAAAAGG CGAATTCGAT
CGTTTTCTTA ACAGCGCTTA CTACGATACC TTGTTAAATG ACGACAAAAT AAAAGCAGAT
GTTATTACTT TCCCCGGTGC AGGGCATGCA ATACAGGTGG ATTTACCCAC AGCTTTTGAA
GTGGTTGTAG GTCAATTTAT AGCGAACGTT ACTAGCGCTA ATGTATCGAA GCCAGCGGTT
GCCTCATCAC AAGAGTCACA AGAGGTGCAT GTAAATGGGT AA
|
|---|
| Protein sequence | MNKYVKEING IRTEIIESRG VGTPVFIFHG NSSGASAYVD LLQSEVGDTY RLIAVSFPGH
GESAYYREDV TEVTIEQLGE FTVDVVNSFG FDKYVLIGQS LGGHALLESL PAHSNAAGLV
LVSSPPIALS RLGDAFLADP TDGLLFKGEL SEQECARFGK AFVQTGSIDK LQELVTLIES
THPQFREQLG AGLGAGKVLD EVALLKQSDL PCLMLKGEFD RFLNSAYYDT LLNDDKIKAD
VITFPGAGHA IQVDLPTAFE VVVGQFIANV TSANVSKPAV ASSQESQEVH VNG
|
|---|
| |