| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3453 |
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| Symbol | |
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| ID | 3966276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4394958 |
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| End bp | 4395962 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922550 |
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| Product | thiamine-phosphate kinase |
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| Protein accession | YP_528920 |
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| Protein GI | 90023093 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00295437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGAGT TTGATTTAAT TAAGCAGTAT TTTCGCAATG TGTCGCCAGT TGTTGAAGGC
ACAACGCTCG GCAATGGCGA TGATTGCGCG CTGCTGCAAT TAAAACCAAA CCAAACTATG
GCGGTATCGG TAGATACATT AGTAGAAGGC GTTCACTTCC CGTGTGGGGC GAGCGCAAAC
GATATTGCGC AGCGCGCATT GCGCACGGCA TTAAGTGACC TTGCCGCTAT GGCCGCAACG
CCGCGCTGGG TAACCCTAGC CCTAACCTTG CCGCAGCATA ATAGCGACTG GTTAAGCGCG
TTTAGTGAAG GCTTGCGCGC CGATTTGCAC GCATTTAATT GCGAGCTTAT AGGCGGCGAC
ACAACCCGCG GTGCACTTAC TATAAGTGTG CAAGTGATGG GCGTAGTAGA AAATTACCCC
GCGTTAACGC GCGCAGGCGC CAAGGTAGGC GATGGTATTT TTGTTACCCA CACTTTAGGC
AATGGCGCTG CCAGCTTATT GCAGGTGCTG GGTAAATTGC AGTCTTTAGC GCTGCCTAAT
GCATTGTGTA GTGAGTTGGA TGACTTATTC TATCGCCCTG AATTAGCGTT TTACGTCGCG
CAACAATTGC ATGCTGTTGC CACCAGCGCC ATTGATATAT CCGATGGCTT AGTGGCAGAT
TTAAAACATA TTTGTACGGC CAGTGGTGTA GGGGCAAAGG TTAATGTAGC GCAGCTACCG
TATTCTGCTA CCGCAAAAAG CTTGGCAAAG GGTATAGAAA ATACAGCGCT AAATAGTGAG
CGGCTTACCG CGCAACAGTT GTTACAGCAG TGGGCTTTAT ACGGCGGTGA TGATTACCAA
CTGTGTTTTA CCGCCCCCGC CCACGCAGTA GCGGAATTAA AAGAGCAAAC CCCGTTGGCC
GCAACGCAAA TAGGTGTGGT AGTGGCCGAG CAGGGTGTGC AGTTGCATAA CAATGGTCAA
GCCTTAGCCG TGCAACACAA AAACGGATAC ACACATTTTG AGTGA
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| Protein sequence | MNEFDLIKQY FRNVSPVVEG TTLGNGDDCA LLQLKPNQTM AVSVDTLVEG VHFPCGASAN
DIAQRALRTA LSDLAAMAAT PRWVTLALTL PQHNSDWLSA FSEGLRADLH AFNCELIGGD
TTRGALTISV QVMGVVENYP ALTRAGAKVG DGIFVTHTLG NGAASLLQVL GKLQSLALPN
ALCSELDDLF YRPELAFYVA QQLHAVATSA IDISDGLVAD LKHICTASGV GAKVNVAQLP
YSATAKSLAK GIENTALNSE RLTAQQLLQQ WALYGGDDYQ LCFTAPAHAV AELKEQTPLA
ATQIGVVVAE QGVQLHNNGQ ALAVQHKNGY THFE
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