| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3425 |
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| Symbol | |
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| ID | 3966151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4359956 |
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| End bp | 4361212 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922522 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_528892 |
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| Protein GI | 90023065 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.146645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000433 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCTTGC TAAGTAAGGC CCGAAAGCTA GTCTCGAACA ACCAAACACC TATGACTTTG
CATAGCGGTT TAAGCTGGTC TAGCGTGTCG CCTGCGATAA ATTCAGGCTA CAAAACATTA
CAGCGCGAAG TGCTAGCCGA ATTAGTAAGA GTGAAAGATG AAAAGGTGGC TCACGCCAAC
GCAGAATTTT ACCAAACAGT AGCGCTGTTG TTCGTAGTGT TAATCGGTAT TCTGGTTGTG
TCTTATATTA TTGCTTCAAG TATTTCGAAG CCACTAAAAC AATTTGTTAA GTCGTTTATT
CATTTGGCCG AGTCTAAAGA TATGGGGCTG CAGGTAGATG AGCGCGGGGA CAATGAGCTG
GCCGAGCTAG GTGCAGCTTT TAATATGCTG GTAAACAGCT TTAATGAGGC GCTAATAGGT
GTGCGAACCC ATGCCTCTTC TATGAATAAC ATAAATGTAG AAACGGCAGA GGCAATGCGC
ACAGCATTGC AGCTATCTGG CAATCAGTTA ACGGCTACAG ATAGTATATC GGTGGCCGTT
AATGAAATGA CAGCAACTAT TCAGGAAGTT TCTAACATGG CTCAGAATAC GTCTGAAGCT
GTGCAAAAAG CCCACGAAAT TTCTGTTTCT AGTGTTAAAA ATGCCGATAG AAGCCGTGAG
TTAATGGAGA GCCTAACCGT AGAGCTGGGT AACACTTCCA AGGTGGTAGG TGTATTAAAT
GATGAAGCCA CGCAAATAAG TGGTGTACTT AACGTTATTC AAGGCATAGC AGAGCAAACA
AATTTACTTG CGCTGAATGC CGTAATTGAG GCTGCCCGAG CAGGCGAGAT GGGGCGGGGG
TTTGCGGTAG TGGCCGATGA GGTGAGAAGC TTGGCCCGCA GAACACAGGA GTCGACAGAA
CAAATACGAG ATCAAGTTCA ATCGCTATTG AGCGGTGCCG ATTCTGCAAC GGAAAACATG
GCCAAATTAC AGCAAGAAGG TTTGCGCTCA GTTGAAATAG TAATGGAAAC CTCTGCAGCG
TTTAACGTAC TAAAAGGTGA ACTAGACAGC ATTACCGATA TGGCCACGCA AATTGCGGTT
GCAACAGAAG AGCAAACATC GGTTTCCAGC GAGATTAATC GCCGCATTTG TGCGGTTAAA
GATGATTCTG AGCAGTTGGC GAGCCAGGCG ACCACCACAA TGAAAATGAC CGATTCGGTT
GCAGTTGAGG GGCGGCTGCT ACAGGAACAT ATAGATAAAT TTAAAACGAA AGGTTAG
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| Protein sequence | MVLLSKARKL VSNNQTPMTL HSGLSWSSVS PAINSGYKTL QREVLAELVR VKDEKVAHAN
AEFYQTVALL FVVLIGILVV SYIIASSISK PLKQFVKSFI HLAESKDMGL QVDERGDNEL
AELGAAFNML VNSFNEALIG VRTHASSMNN INVETAEAMR TALQLSGNQL TATDSISVAV
NEMTATIQEV SNMAQNTSEA VQKAHEISVS SVKNADRSRE LMESLTVELG NTSKVVGVLN
DEATQISGVL NVIQGIAEQT NLLALNAVIE AARAGEMGRG FAVVADEVRS LARRTQESTE
QIRDQVQSLL SGADSATENM AKLQQEGLRS VEIVMETSAA FNVLKGELDS ITDMATQIAV
ATEEQTSVSS EINRRICAVK DDSEQLASQA TTTMKMTDSV AVEGRLLQEH IDKFKTKG
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