Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3423 |
Symbol | |
ID | 3966149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4356947 |
End bp | 4358149 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922520 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_528890 |
Protein GI | 90023063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00366456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACAAG GTATACAGCA TTGGGCACAT ACGCGTAAAC ACGAGCTAGA TTGGTTGCGG GTATTGGCCT TTGGCTTACT TATTATTTAC CACATAGGTA TGGCCTATGT GGCGGACTGG GGCTGGCATG TTAAAAGCAG TCACCAAAGT GAATTTTTAC AAAACCTTAT GCTGTGGTCT AATCAGTGGC GAATGCCTCT GTTATTTATA ATTAGTGGTG CAGCCGTTTC GTTTCAGCTT GCTCGCGAGC CAAGCTGGCG ATTTGCTACA GGGATAACTG GGCGTGTGCT GCCCGCGCTA TTCTTCGGAA TGTTTATTAT TGTTGCCCCA CAGGTGTATA TAGAGTTAAA AAGTAAGGGC CTGCTAGCGG ACACTAACTT CTTTAGTTTT TGGCAAGACT ACGCAGGTTC CGCCGTTGGC CTAGGCGAGC CTCTGCCCCC TGCCTACATT CGCGGTGCAT ATACAAACCT AACCTGGAAC CACCTGTGGT ACCTGCCGTA TCTACTCGCA TACAGTCTTG TGGCATGGGC TATTTACCCA CTTATATGCA ACAGCTACAC AGCCAAAATT GCACCTGTAA TTAATGTATT ACCCAAAGCA AGCATTGGGC TTGGTCTATA TATACTACCT ATCGCCACAC TCTTTATTAT TGGCGAAACA CTTTGGCAGG CCTATCCCAC CACCTTTGAC CTAGTCAATG ACTGGTACAA CAATGCGCGT TATTTTTTCG CTTTTATTTT CGGTGTACTC GCAGTTCGCA GTACCACGCT ATGGCAAGCC ATTCATCAGT TACGCACCTT ATCGGTAGTG GCTGCAACAT TAACCTATGC TTTAATTTTA TTTTTTATTC ATGGTGGTGA GCTAAGCACG TATATACCAT GGCTAAATAA TTACGAGAAC ACAATTCGCA GCATACTATG GCCTGCAAAT ACTTGGCTTT GGCTAATGAC TGTACTAGGT TACGGGCAGC ACTTTTTTAA CAAGCCAAAT AAGTTTATTA GCAAAGCCAA CAAAGGTGTT TTCTGTTTTT ACATTGTGCA TCAAACAATA ATTGTTGTTG CTGTGTACTG GTTTAGTTCG TATTCACTGA GCCCTTGGTT AGAGCCCATT TTGGTAACTG TAATTACCGT AACGGGTTGC TTAGTATGCT ATTGGTGCGT GCCCCGAACA GCGTGGCTTA AAAAGCTATT GGGGGTGAGC TAA
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Protein sequence | MQQGIQHWAH TRKHELDWLR VLAFGLLIIY HIGMAYVADW GWHVKSSHQS EFLQNLMLWS NQWRMPLLFI ISGAAVSFQL AREPSWRFAT GITGRVLPAL FFGMFIIVAP QVYIELKSKG LLADTNFFSF WQDYAGSAVG LGEPLPPAYI RGAYTNLTWN HLWYLPYLLA YSLVAWAIYP LICNSYTAKI APVINVLPKA SIGLGLYILP IATLFIIGET LWQAYPTTFD LVNDWYNNAR YFFAFIFGVL AVRSTTLWQA IHQLRTLSVV AATLTYALIL FFIHGGELST YIPWLNNYEN TIRSILWPAN TWLWLMTVLG YGQHFFNKPN KFISKANKGV FCFYIVHQTI IVVAVYWFSS YSLSPWLEPI LVTVITVTGC LVCYWCVPRT AWLKKLLGVS
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