Gene Sde_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3423 
Symbol 
ID3966149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4356947 
End bp4358149 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content44% 
IMG OID637922520 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_528890 
Protein GI90023063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00366456 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACAAG GTATACAGCA TTGGGCACAT ACGCGTAAAC ACGAGCTAGA TTGGTTGCGG 
GTATTGGCCT TTGGCTTACT TATTATTTAC CACATAGGTA TGGCCTATGT GGCGGACTGG
GGCTGGCATG TTAAAAGCAG TCACCAAAGT GAATTTTTAC AAAACCTTAT GCTGTGGTCT
AATCAGTGGC GAATGCCTCT GTTATTTATA ATTAGTGGTG CAGCCGTTTC GTTTCAGCTT
GCTCGCGAGC CAAGCTGGCG ATTTGCTACA GGGATAACTG GGCGTGTGCT GCCCGCGCTA
TTCTTCGGAA TGTTTATTAT TGTTGCCCCA CAGGTGTATA TAGAGTTAAA AAGTAAGGGC
CTGCTAGCGG ACACTAACTT CTTTAGTTTT TGGCAAGACT ACGCAGGTTC CGCCGTTGGC
CTAGGCGAGC CTCTGCCCCC TGCCTACATT CGCGGTGCAT ATACAAACCT AACCTGGAAC
CACCTGTGGT ACCTGCCGTA TCTACTCGCA TACAGTCTTG TGGCATGGGC TATTTACCCA
CTTATATGCA ACAGCTACAC AGCCAAAATT GCACCTGTAA TTAATGTATT ACCCAAAGCA
AGCATTGGGC TTGGTCTATA TATACTACCT ATCGCCACAC TCTTTATTAT TGGCGAAACA
CTTTGGCAGG CCTATCCCAC CACCTTTGAC CTAGTCAATG ACTGGTACAA CAATGCGCGT
TATTTTTTCG CTTTTATTTT CGGTGTACTC GCAGTTCGCA GTACCACGCT ATGGCAAGCC
ATTCATCAGT TACGCACCTT ATCGGTAGTG GCTGCAACAT TAACCTATGC TTTAATTTTA
TTTTTTATTC ATGGTGGTGA GCTAAGCACG TATATACCAT GGCTAAATAA TTACGAGAAC
ACAATTCGCA GCATACTATG GCCTGCAAAT ACTTGGCTTT GGCTAATGAC TGTACTAGGT
TACGGGCAGC ACTTTTTTAA CAAGCCAAAT AAGTTTATTA GCAAAGCCAA CAAAGGTGTT
TTCTGTTTTT ACATTGTGCA TCAAACAATA ATTGTTGTTG CTGTGTACTG GTTTAGTTCG
TATTCACTGA GCCCTTGGTT AGAGCCCATT TTGGTAACTG TAATTACCGT AACGGGTTGC
TTAGTATGCT ATTGGTGCGT GCCCCGAACA GCGTGGCTTA AAAAGCTATT GGGGGTGAGC
TAA
 
Protein sequence
MQQGIQHWAH TRKHELDWLR VLAFGLLIIY HIGMAYVADW GWHVKSSHQS EFLQNLMLWS 
NQWRMPLLFI ISGAAVSFQL AREPSWRFAT GITGRVLPAL FFGMFIIVAP QVYIELKSKG
LLADTNFFSF WQDYAGSAVG LGEPLPPAYI RGAYTNLTWN HLWYLPYLLA YSLVAWAIYP
LICNSYTAKI APVINVLPKA SIGLGLYILP IATLFIIGET LWQAYPTTFD LVNDWYNNAR
YFFAFIFGVL AVRSTTLWQA IHQLRTLSVV AATLTYALIL FFIHGGELST YIPWLNNYEN
TIRSILWPAN TWLWLMTVLG YGQHFFNKPN KFISKANKGV FCFYIVHQTI IVVAVYWFSS
YSLSPWLEPI LVTVITVTGC LVCYWCVPRT AWLKKLLGVS