| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3420 |
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| Symbol | |
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| ID | 3966146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4352900 |
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| End bp | 4355077 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922517 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_528887 |
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| Protein GI | 90023060 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0210167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA ACACTCTCTT TACGCCTTTG CGTACTGTGG GTGCTGCAGT TGCGATAGCT
TTATCGCCTG TAGCCTTTGC AGACGTAACG TGCGAAGTAA CGAACTTTAA CCAGTGGAAT
AGTGGCTACC AAGCCGATGT TCGTGTTACA AACAGCGGTA GCGCTGTTAG TGGCTGGACC
GTAAATTTAA ATTTTGCCTC AGCCCCGCAA ATGACAAATG GCTGGAACGC AGCTTTGAGT
ACTAGCGGCA ATACAATTAG TGCATCTAAT ATTAGTTGGA ATGGCAATTT GGGTAATGGT
CAGTCCACCA GCTTTGGTTT TCAGGGCAAT TCAAATGGTA ACTTGGCAAC GCCAACGTGT
GTAGGTAGCG GTACGGGGTC TTCTAGCAGC TCTTCATCCA GCTCTACTTC TAGCACAAGC
TCATCATCTA CAAGTTCTTC TAGCACGTCT TCTACTAGCT CTAGCAGTTC ATCCTCTGGT
GGTGAATGTG TAGAAATGTG TAAGTGGTAT CAAGATGCAC CGCGCCCATT ATGTAATAAT
CAAGACAGTG GTTGGGGTTG GGAAAACAAT CAAAGCTGTA TTGGTCGCAC TACTTGTAAC
AGCCAATCTG GCAATGGTGG TGTAATTAAT AGTTGCCCAA GTTCTTCAAG TTCTTCAAGT
TCTTCTAGCA CTTCGTCTAC CAGCTCATCT AGTACTTCAA GTACTTCATC GAGCTCAACA
AGTAGTACTT CAAGCACTTC ATCAAGTTCC ACAAGCTCTA CTAGCAGCAG CTCAACCTCT
AGCACTAGCT CGTCGTCTTC AAGTGGTGGT GGAGTATTCC GCGTAGATGC TACCGGTAAT
ATTACTAAAA ATGGTGAAGT ACTGCCTGTT CGTTGTGGTA ACTGGTTTGG TCTAGAGGGC
CAGCACGAGC CTTCAGATGC GCAAAATAAC CCAGGCGGTG CGCCGCTTGA ATTATATGTT
GGCAACATGT GGTGGGTAGA TAGTGGCCGC ACTATTCAGC AAACCATGAG CGAAATTACC
GCCCAAGGTA TCAACATGGT TCGCTTGCCT ATTGCACCGC AAACATTAAA CCCTAACGAC
CCTCAAGGTG TGGGTGATGT GCGCAACGGC GGCGTGCTTA AAAATCACGA ATCTGTGCAG
CAAACCAATG CACGTCAAGC GTTAGAAGAC TTCATTGTTC AAGCTAACGA AAATGACATT
CAAGTGCTAA TTGATATTCA CTCTTGTAGT AACTACGTGG GTTGGCGTGC AGGCCGTTTA
GATGCAGAGC CTCCTTATGT GGATGCAACG CGAGTGGGTT ATGACTTTAC CCGTGAAGAT
TATTCTTGTG GCACCAATGT GGGCCCAGGT GTAACTGTGC ACGAGTACAA CGAGGAAATT
TGGTTAAACA ACTTGCGTGA GATTGCTGGT TTATCTGAAT CCTTGGGCGT TGATAATATT
ATCGGTATCG ATATTTTTAA CGAACCATGG GATTACACTT GGGAAGAGTG GAAAGCACTT
TCTGAAAGCG CTTATCAAGC CATTAGCGAA GTTAACCCAG ATATTCTAAT CTTTGTTGAG
GGTGTTGCAG GCGGCACGGG TGCTGGTGTT GATGTGCCAC ATGGAGACGA GTCTTCTAAC
CCTAACTGGG GCGAAAACTT TTATCCTGCG CAAACTGCTC CGCTTAATAT TCCAAAAGAT
CGTCTAGTTA TTTCACCGCA TACCTATGGC CCATCTGTAT TTGTTCAGCG TCAATTTATG
GACCCGAATG ATCCAGAGTG TGTTGGTTTA GAAGGTGATG AGGCGGCTGA AGCTGGCTGT
CAAATTGTTA TCGATTATGC AACCTTAGCA GCTGGTTGGG ATGAGCATTT CGGCTTCTTA
CGTGAGCAAG GCTTTGCCAT GGTAGTGGGT GAGTTTGGTG GCAACATGGA TTGGCCAAAT
GGCACGCGCC AAGCAGAAAA AGATATGTGG AGCCACATCA CCCCTGGAAT CGACAGACAG
TGGCAAGAAG CGTTTGTTGA CTACATGGTT GAGAAAAACA TCCAAGCTTG TTACTGGTCA
ATTAACCCAG AGTCTGGCGA CACTGGCGGT TGGTATGGTC ACGAGTACGA CCCTGTTTCT
AACGATGCAG GTTGGGGGCG TTGGTTAGAC TTCGATTCTC GCAAAACTAA CTTACTTAAA
GAGCTTTGGG GTATTTAA
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| Protein sequence | MKINTLFTPL RTVGAAVAIA LSPVAFADVT CEVTNFNQWN SGYQADVRVT NSGSAVSGWT
VNLNFASAPQ MTNGWNAALS TSGNTISASN ISWNGNLGNG QSTSFGFQGN SNGNLATPTC
VGSGTGSSSS SSSSSTSSTS SSSTSSSSTS STSSSSSSSG GECVEMCKWY QDAPRPLCNN
QDSGWGWENN QSCIGRTTCN SQSGNGGVIN SCPSSSSSSS SSSTSSTSSS STSSTSSSST
SSTSSTSSSS TSSTSSSSTS STSSSSSSGG GVFRVDATGN ITKNGEVLPV RCGNWFGLEG
QHEPSDAQNN PGGAPLELYV GNMWWVDSGR TIQQTMSEIT AQGINMVRLP IAPQTLNPND
PQGVGDVRNG GVLKNHESVQ QTNARQALED FIVQANENDI QVLIDIHSCS NYVGWRAGRL
DAEPPYVDAT RVGYDFTRED YSCGTNVGPG VTVHEYNEEI WLNNLREIAG LSESLGVDNI
IGIDIFNEPW DYTWEEWKAL SESAYQAISE VNPDILIFVE GVAGGTGAGV DVPHGDESSN
PNWGENFYPA QTAPLNIPKD RLVISPHTYG PSVFVQRQFM DPNDPECVGL EGDEAAEAGC
QIVIDYATLA AGWDEHFGFL REQGFAMVVG EFGGNMDWPN GTRQAEKDMW SHITPGIDRQ
WQEAFVDYMV EKNIQACYWS INPESGDTGG WYGHEYDPVS NDAGWGRWLD FDSRKTNLLK
ELWGI
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