| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3414 |
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| Symbol | |
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| ID | 3966140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4346961 |
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| End bp | 4347551 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922511 |
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| Product | hypothetical protein |
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| Protein accession | YP_528881 |
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| Protein GI | 90023054 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.30652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0495124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAATA TTGGCATTTA TATTTATGAT CGTGCCGAGG TGTTAGATTT TTCGGGGCCG
TTTGAGGTGT TTAGTACAGC CACTAGAATG TGTGAAAACG ATACGCCGTT TAATGTTTTT
TTAGTGGCGC AACAGTTGCA GCCAGTGGTG GCGCGGGGTG GGTATCGCGT GCTGCCAGAG
TACGACTTTA GCAACCACCC ATCCATTGAT TTACTTCTAG TGGTGGGTGG CGTGCACACT
GACGAAATGG ACAAAAGCGA TGTGGTGGCG TGGTTGGCCT TGCAGGCGAC TAAAGCTAAG
TGGGTTGCTT CTGTATGTAC TGGGGCATTT CTATTGGCGC AGGCGGGCAT TATTACAGAC
CAAAGCGTTA CCACCCATTG GGAAGATATC GCCGATTTGC GCAAGCAGTT TCCAGCATTA
AATGTGCAGA GTGATGTGCG TTGGGTCGAT GAAGGACGCC TTACAACCTC TGCTGGTATA
TCGGCGGGTA TAGATATGAG CTTGTTTTTA GTCAGTAAAC TACATAGTAA GCCGCTAGCC
GAAGCGACGG CTCGTCAAAT GGAATACGAT TGGGTTAAAT CTAACGCCTA G
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| Protein sequence | MINIGIYIYD RAEVLDFSGP FEVFSTATRM CENDTPFNVF LVAQQLQPVV ARGGYRVLPE
YDFSNHPSID LLLVVGGVHT DEMDKSDVVA WLALQATKAK WVASVCTGAF LLAQAGIITD
QSVTTHWEDI ADLRKQFPAL NVQSDVRWVD EGRLTTSAGI SAGIDMSLFL VSKLHSKPLA
EATARQMEYD WVKSNA
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