Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3412 |
Symbol | |
ID | 3966138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4346246 |
End bp | 4346578 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922509 |
Product | ATPase |
Protein accession | YP_528879 |
Protein GI | 90023052 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.566021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0425953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGT TTTTCTTTAA GGGGCGTGTG GATGCGAGGC AAGATTACCG CAGTTACGGT AACAAAACCA AGCCCGAGGC AAACCCCGGT AGCGAGCATA ACCCCATTGA GCTTTGGGTA GATAACGCTG AACGTGAGCA AGAAATTAAA GCATTATTAG ATCAGCACGA GGTGTTTGCT GTGGTGCATG TGGATGCAGC CACAGAAGAA AATATCCAGC AATTAGATGC TGTACTGGCT ACCCCTAAAA CCGTCGTGTT AGAAAAAACA CCCAATCGCA ACGACCCATG CTTATGCGGC AGTGGCAAAA AATATAAAAA GTGTTGTGGC TAG
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Protein sequence | MSKFFFKGRV DARQDYRSYG NKTKPEANPG SEHNPIELWV DNAEREQEIK ALLDQHEVFA VVHVDAATEE NIQQLDAVLA TPKTVVLEKT PNRNDPCLCG SGKKYKKCCG
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