Gene Sde_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3412 
Symbol 
ID3966138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4346246 
End bp4346578 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content46% 
IMG OID637922509 
ProductATPase 
Protein accessionYP_528879 
Protein GI90023052 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.566021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0425953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGT TTTTCTTTAA GGGGCGTGTG GATGCGAGGC AAGATTACCG CAGTTACGGT 
AACAAAACCA AGCCCGAGGC AAACCCCGGT AGCGAGCATA ACCCCATTGA GCTTTGGGTA
GATAACGCTG AACGTGAGCA AGAAATTAAA GCATTATTAG ATCAGCACGA GGTGTTTGCT
GTGGTGCATG TGGATGCAGC CACAGAAGAA AATATCCAGC AATTAGATGC TGTACTGGCT
ACCCCTAAAA CCGTCGTGTT AGAAAAAACA CCCAATCGCA ACGACCCATG CTTATGCGGC
AGTGGCAAAA AATATAAAAA GTGTTGTGGC TAG
 
Protein sequence
MSKFFFKGRV DARQDYRSYG NKTKPEANPG SEHNPIELWV DNAEREQEIK ALLDQHEVFA 
VVHVDAATEE NIQQLDAVLA TPKTVVLEKT PNRNDPCLCG SGKKYKKCCG