Gene Sde_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3401 
Symbol 
ID3966127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4336899 
End bp4337627 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content46% 
IMG OID637922498 
Productphosphopantetheinyl transferase 
Protein accessionYP_528868 
Protein GI90023041 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.864684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA TTGATACCTC ATTTTCTGTC CCGCTGCTTG GCCAATGCGA ACTTTTGCTC 
TGCCACTTTT ACCCACAACA CTGGGATGCA AACACCCCCA AGCAATATCA AATAGATGTG
CCGCAATACT TGTTAGAAAA AGCGGTAGAT AAACGTTTAG CGGAATATGT AGCCGGCCGG
CATTTAGCAA AAACCTTATT ACAAAGGCTT AATATTGGCG CGCAAGTAGA GCGCGACGAA
AAAACACGCG CCCCAATTTG GCCACAAGGT ATTGTTGGCT CCATTAGCCA CTCGAAGGGT
ATCGCTGCCT GCGCCGTACA AAGGCAAACA AAAATTGCGG GCATTGGTAT TGATATAGAG
CATTGGACAC CAGCCAAAAC CGCAGCATCA ATAAGTAAAG AAGTTTGGCT ACCAGAAGAA
CAACACTTAC TTAACCACAT TGATTGGTCT TTCGAGCAAG CGTTAACAGT TGTGTTTTCT
GCCAAGGAGG CGCTCTATAA AGCGCTGCAC CCGCAGGTTG GGAAGTTTTT TGGGTTTAAG
GCGGCACGAT TGTGCCTGCA AAGCGGAGAC AGTAATTCAG GCAGCCTATG CTTTGAATTA
ACAGAGCACT TACATACTGC AGTACCCAAA GGCGCAGTTT TTAAGCTTGC GTATTATTGC
AGCGATGACT GGGTAGTAAC AGGTATTGAG TTAGAACATA AAAAGCAGGC ACAAAAAAGC
CGCGATTAG
 
Protein sequence
MQLIDTSFSV PLLGQCELLL CHFYPQHWDA NTPKQYQIDV PQYLLEKAVD KRLAEYVAGR 
HLAKTLLQRL NIGAQVERDE KTRAPIWPQG IVGSISHSKG IAACAVQRQT KIAGIGIDIE
HWTPAKTAAS ISKEVWLPEE QHLLNHIDWS FEQALTVVFS AKEALYKALH PQVGKFFGFK
AARLCLQSGD SNSGSLCFEL TEHLHTAVPK GAVFKLAYYC SDDWVVTGIE LEHKKQAQKS
RD