Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3401 |
Symbol | |
ID | 3966127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4336899 |
End bp | 4337627 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922498 |
Product | phosphopantetheinyl transferase |
Protein accession | YP_528868 |
Protein GI | 90023041 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2977] Phosphopantetheinyl transferase component of siderophore synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.864684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA TTGATACCTC ATTTTCTGTC CCGCTGCTTG GCCAATGCGA ACTTTTGCTC TGCCACTTTT ACCCACAACA CTGGGATGCA AACACCCCCA AGCAATATCA AATAGATGTG CCGCAATACT TGTTAGAAAA AGCGGTAGAT AAACGTTTAG CGGAATATGT AGCCGGCCGG CATTTAGCAA AAACCTTATT ACAAAGGCTT AATATTGGCG CGCAAGTAGA GCGCGACGAA AAAACACGCG CCCCAATTTG GCCACAAGGT ATTGTTGGCT CCATTAGCCA CTCGAAGGGT ATCGCTGCCT GCGCCGTACA AAGGCAAACA AAAATTGCGG GCATTGGTAT TGATATAGAG CATTGGACAC CAGCCAAAAC CGCAGCATCA ATAAGTAAAG AAGTTTGGCT ACCAGAAGAA CAACACTTAC TTAACCACAT TGATTGGTCT TTCGAGCAAG CGTTAACAGT TGTGTTTTCT GCCAAGGAGG CGCTCTATAA AGCGCTGCAC CCGCAGGTTG GGAAGTTTTT TGGGTTTAAG GCGGCACGAT TGTGCCTGCA AAGCGGAGAC AGTAATTCAG GCAGCCTATG CTTTGAATTA ACAGAGCACT TACATACTGC AGTACCCAAA GGCGCAGTTT TTAAGCTTGC GTATTATTGC AGCGATGACT GGGTAGTAAC AGGTATTGAG TTAGAACATA AAAAGCAGGC ACAAAAAAGC CGCGATTAG
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Protein sequence | MQLIDTSFSV PLLGQCELLL CHFYPQHWDA NTPKQYQIDV PQYLLEKAVD KRLAEYVAGR HLAKTLLQRL NIGAQVERDE KTRAPIWPQG IVGSISHSKG IAACAVQRQT KIAGIGIDIE HWTPAKTAAS ISKEVWLPEE QHLLNHIDWS FEQALTVVFS AKEALYKALH PQVGKFFGFK AARLCLQSGD SNSGSLCFEL TEHLHTAVPK GAVFKLAYYC SDDWVVTGIE LEHKKQAQKS RD
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