| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3384 |
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| Symbol | |
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| ID | 3965933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4316648 |
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| End bp | 4318933 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922481 |
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| Product | Signal transduction histidine kinase-like |
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| Protein accession | YP_528851 |
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| Protein GI | 90023024 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.411252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC GCTCCGTTGG TTATATGCTG CTTGCTGGGC TGGGTTACTG GCTTCTCGGT
GCCGCCGCTG GCTTTTTTAC AATTCCCCCT GGTTACGCCA GCCCGATTTG GCCAGCCGCA
GGTTGGGCGG TAATTTGCTG TATTCGCTTT GGTTGGCCAG CACTTCTGGG CGTTTTCTTC
GCATCCTTTT ACCTCAATAT TCAATTCTCT AATGCTTCGC TGTTACAGCC CTCGATTGCT
TGGGTTGTCG CAGGGTTTAT CGCGCTTGGA GCGGTGTGTC AGGCGGGGCT TGCGTCCTAC
TGCGCTAAGC GGTTTGCACT CTCGGCACAC GGCGACGCGA TAACGGTTAA CCCTGTTAAG
CTAGCCTTGG TCATAGGCCC CCTGGCTAGT TTGATGTCCC CTACTGTTGG TATTTCTACA
TTGGTATCGT TCGATATCGT CCCCGTACAA TCGGCGAGCT TAAATTGGTT GCACTGGTGG
ATAGGTGATG CGATAGGGGC AATGGCCTTT GCCCCATTTA TATCGTTAAT GAGTATGGCG
GACCATTGGT CTGCCCCGCG TAGGGTCCTG GTGTTTTTGG GTTTCTACGT ATTATTAATT
GCGCTGGTTA GTCTCACCTT TGTGCAATCG CGTACCGCTG AAGAGCAACG AATTGAAAAT
GTTTTTAACG AGCAAGTGGA AACGGCGCAT CAGTCGATAC TTAAACAGTT GCAGGCCATC
ACTTTTGCTG GGCGCAGTAT TGCATCGCTA TTTGAAACTT TTCCCGCGGT GGAATACACG
CAGTTTAATC ATTACGCTCA AGGTGTGTAC GAGTATATTC CCGGCTCTCA AGGTATTGGC
TGGGTACCGG TAGTGGCCGA CGCAAGCCGT CATACTTTTG AGCAGGCCAT GGCGCAAGCT
TTAGGCGAGC GCTTTGAGTT CAAGGAGCTT TATCAAGGTT CGATGGTGTC GGCGAGTACT
AGAGAGCGCT ATTACCCTGT GTATTATATT TTCCCCTTCG AGCCAAACCG GCGCGCTGCG
GGGTTTGATT TAGGTTCAAA TTCTGAAAGG TTGATAGCTA TTCAGCAGTT AATAAGCTCG
CGCGCAGAGG TAATCACGGC GCCAATTACT TTGGTACAAG AAACCGGTAA TCAGCGAGCG
TTTTTGTTAT TTACCCCCAT AGAAAGTAAC AACAAAATTT CAAGTTTTGT ATCGAGCGTT
TACAGGGCAG AAGATTTACT ACTTGCTGGT GTACCGGAAA GTGTAATTGA TACAGTTGGT
ATTGTGATCA CTGATGTAAC GGCCAATGAT GACCCGCAAG CCCTCTACGG GGGTGAGACT
GGCAAGGTGA TCTATGAGGT GGTGCGCAGT GTTGATTTTG GTCAGCGCAC TTGGCAAATA
CGCTATAGCA TAGGCGAGAA TTATGTAGCC CAGCATCAAA CGTCAACCGT GTGGTTTGTA
TTAATTATCG GCTTTATCGT GGTTATAGTA TTTGGCTTGT TTATTTTACA AATACTAAAC
AGTCACTCGC TAATCAAGCA CGAAGTAAGG GTGAAAACCT TAGCGCTCGA AGAAGCGCTA
CAGGTAGCCA AAGATGCAAA TAGCGTTAAA ACCAATTTTC TAGCGTGCAT GTCACATGAA
TTGCGCACTC CGCTTAATTC AATTATTGGC TTTAGTGTTC GCTGTTTAAA AATACTTTCG
CCAAGCCACG ATCAAAAACT AATAACGGCA ATTACTGTTA TTGAGCGCAA TGGGCAACAC
TTATTGGGTT TGATTAATGA TGTGTTAGAT CTCGCGAAAG TTGAAGCGGG CAAGATGACA
ATAACCAAGG CCCCAATTGA TATTGCCGCA ACAATGGATG AGGTTGTAAC TACGCTCCAG
CCATTGGTGG ACGATAAACC CATAGAGATA AAAGTTAAAA CACCGCCACT AAACACAATT
CTTGCCGACC AACAAAGGTT TAAGCAAATA TTTATCAATT TGGGGGCGAA TGCCATTAAT
TTTACACGTG AAGGCAGAGT ACAAATTGAC TACGCATTAG AAACAACTAA AGGTAAGCAA
GCCTTGCGCA TAAACGTGAG AGACACAGGT ATTGGTATAG CTAAAGAACA CGTAGCTAAA
GTGTTTCAGC GCTTTGAGCA GGTGGGAGAG CAGTTTCAGC CTGGCAGCTT GGGGTCTGGA
TTGGGTTTAG CCCTAGTTCA CGAATTTGTT ACCTTGCACG GAGGCCGTAT TAAAGTGACA
AGTGAGGTAG GCAGGGGCTC GGTTTTTAGT GTTTGGCTGC CAATAGATAC CGAGGCAGAG
CAGTAA
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| Protein sequence | MTARSVGYML LAGLGYWLLG AAAGFFTIPP GYASPIWPAA GWAVICCIRF GWPALLGVFF
ASFYLNIQFS NASLLQPSIA WVVAGFIALG AVCQAGLASY CAKRFALSAH GDAITVNPVK
LALVIGPLAS LMSPTVGIST LVSFDIVPVQ SASLNWLHWW IGDAIGAMAF APFISLMSMA
DHWSAPRRVL VFLGFYVLLI ALVSLTFVQS RTAEEQRIEN VFNEQVETAH QSILKQLQAI
TFAGRSIASL FETFPAVEYT QFNHYAQGVY EYIPGSQGIG WVPVVADASR HTFEQAMAQA
LGERFEFKEL YQGSMVSAST RERYYPVYYI FPFEPNRRAA GFDLGSNSER LIAIQQLISS
RAEVITAPIT LVQETGNQRA FLLFTPIESN NKISSFVSSV YRAEDLLLAG VPESVIDTVG
IVITDVTAND DPQALYGGET GKVIYEVVRS VDFGQRTWQI RYSIGENYVA QHQTSTVWFV
LIIGFIVVIV FGLFILQILN SHSLIKHEVR VKTLALEEAL QVAKDANSVK TNFLACMSHE
LRTPLNSIIG FSVRCLKILS PSHDQKLITA ITVIERNGQH LLGLINDVLD LAKVEAGKMT
ITKAPIDIAA TMDEVVTTLQ PLVDDKPIEI KVKTPPLNTI LADQQRFKQI FINLGANAIN
FTREGRVQID YALETTKGKQ ALRINVRDTG IGIAKEHVAK VFQRFEQVGE QFQPGSLGSG
LGLALVHEFV TLHGGRIKVT SEVGRGSVFS VWLPIDTEAE Q
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