| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3346 |
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| Symbol | |
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| ID | 3965895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4274048 |
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| End bp | 4275052 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922443 |
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| Product | ketopantoate hydroxymethyltransferase |
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| Protein accession | YP_528813 |
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| Protein GI | 90022986 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR02291] alpha-L-glutamate ligase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0113741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0076902 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGCGA AGCTGGCCAA CAAATTAATA GATGGCATTC CGTTTGTGCG GAATATGGCC
GCGGTGCAAT TGCACCGCAA AGGTATATTG GGCATGAATA GACGCAATGC CCAATACATA
AGCCCCAACA ACGCCCGCTA CTTATTCCCG CTTGTAGATG ACAAGCTACA AACGAAAAAG
CTCGCCATAG AAAACGGGGT GAATGTACCC ACCTTGCTTG GGGTGGTAGA TAACCAGCAC
GATGTAAGCA TGTTGAGCGA ACTAGTAGGG GGCTTAGATA GTTTTTGTAT CAAGCCGGCT
AAAGGTTCGG GCGGTAAAGG TATACTTATT ATTGCGCGGC GTGAGGGCGA TCAGTTTTTC
CGCTCCAATG GTCAGCCTAT TTCTATGAGC GACATAGAGC GTCACGTATC CAATATTTTG
GCGGGGTTGT TCTCGCTGGG TGGGGCAACC GATGTGGCGA TGATGGAATC GCTAATTGTG
GTAGAGCCAG AATTTAAAAA TTACAGCTAC GAGGGTGTGC CCGATATTCG CGTGATTGTA
TTTCGCGGTG TACCGGTTAT GGCCATGATG CGCTTGTCGT GCGCGGCGTC CCACGGCAAG
GCCAATTTGC ACCAAGGCGC TGTAGGTGTG GGTATCGATA TGGCCACCGG CAACGCTGTA
AACGCAGTGC AGCGCGACAA ACCGGTAAAG TACCACCCCG ATACCGAACA AGATTTAATG
CAATTAAATA TTCCCCACTG GCATCAACTT TTAGAGCTGG CCTGCGAGTG TGCCGATATG
ACAGGGTTAG GCTATTTGGG GGTGGATTTA GTTATCGACG CCAATATGGG CCCAGTGCTT
TTGGAGCTGA ATGCTCGACC GGGCCTCTCC ATTCAGATAG CAAATAGCGC GGGTTTAGTG
CCGCGCCTAA AGGCTGTAGA GGGGCTTTCT CGGCCAGAGC GAATGAGTAT AAAACGGCGA
GTGGAATTCG CAGGTAAGCA TTTTTCGGCT AAACCTCTGC TTTAG
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| Protein sequence | MLAKLANKLI DGIPFVRNMA AVQLHRKGIL GMNRRNAQYI SPNNARYLFP LVDDKLQTKK
LAIENGVNVP TLLGVVDNQH DVSMLSELVG GLDSFCIKPA KGSGGKGILI IARREGDQFF
RSNGQPISMS DIERHVSNIL AGLFSLGGAT DVAMMESLIV VEPEFKNYSY EGVPDIRVIV
FRGVPVMAMM RLSCAASHGK ANLHQGAVGV GIDMATGNAV NAVQRDKPVK YHPDTEQDLM
QLNIPHWHQL LELACECADM TGLGYLGVDL VIDANMGPVL LELNARPGLS IQIANSAGLV
PRLKAVEGLS RPERMSIKRR VEFAGKHFSA KPLL
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