Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3312 |
Symbol | |
ID | 3965823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4224564 |
End bp | 4225658 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922409 |
Product | gamma-glutamyl phosphate reductase GPR |
Protein accession | YP_528779 |
Protein GI | 90022952 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00700873 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTGTT GTGTCATCGA TGTATCTGGT CAAGAGTTTA TCCTGTATTT TAATGACGAT ATGGCACTGT GCGATGTGCG TGCAAACGGC ATTACTTGTG CAATATCTCA AGATGCGACG AGCGGCGAAA TAAGTGTGCA CCTTAACGAG CACGGTGTAA TTAAGCTTGT GCTGCAAGCT GTTGTAGGTG ATGAAACTGC CGTGGGCTAT CGTGCTTATT TGAGCGATGC GTTTGTGGGT CAGGGGGCGG CCAGCTTGCA AGACGTTGAC GCTTCCATGT TGCAAGCGCA GGTATTAGCT GCGCCGCAAT CAACAGGTGT AGCTACGTCG CGATCACAAG GTAAGTGGTT AGCTATTGCC GGCATTGGTT TTAAGCTGCT TAAAACGGTA AAGGTTGTAA AGGTGGCTTT GTTAGCTGCA TCTGTTGGGG TGTACAGCGT AATCTTCACG CCTCAATTTG CTGTGGCATT GGTGGCCATT CTTATGTTCC ATGAATATGG CCATATTCGC GGTATGAAAA AGTTTGGCAT ACCCACCAAA GGTATTTATT TAATTCCGTT TTTTGGTGGT ATGGCGATTG GCGAAAAGCA CAAGTCTCAA TGGCAAGATG TTTATATCTC TATGATGGGC CCTGTATATG GTTTAATTAT GACAGTGGTC TTTTACCTTA TTTACTCGTT TACAGGCAGC CACTTCGCCG GTTTAGTCGC CTCTATTAGC GCGCTATTAA ACCTGTTTAA TTTGCTGCCG GTGCACCCGC TAGATGGTGG TCGAGTAATT AAAGCGCTTG TTTTCTCGTA CAGAAATTAT TGGGCACTGT TAATATTGCT TACCCTTTCT GCCGGCTGTG CAGTATTAAG TGCAATGTTT GGGTTTTATT TTTTGGTGTT TTTTATTGTG TTGGGCGTTA TAGATACCTT GTCCGGTTGG CGAGTCGGGT TGGAGCAAGA TGTAACCCCG CTTACCCCTT ACGGTATTTT GTTTAGTTTG GGGTGGTACT TTTTAGTGGT GGGTTTATTT TTGGCTATGA TTGTTTTAAT TGCTCTAGAT GGTTTACCCG GGGCCGAAAT TGCTACAAAA GTGTTGTCAT CGTAA
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Protein sequence | MKCCVIDVSG QEFILYFNDD MALCDVRANG ITCAISQDAT SGEISVHLNE HGVIKLVLQA VVGDETAVGY RAYLSDAFVG QGAASLQDVD ASMLQAQVLA APQSTGVATS RSQGKWLAIA GIGFKLLKTV KVVKVALLAA SVGVYSVIFT PQFAVALVAI LMFHEYGHIR GMKKFGIPTK GIYLIPFFGG MAIGEKHKSQ WQDVYISMMG PVYGLIMTVV FYLIYSFTGS HFAGLVASIS ALLNLFNLLP VHPLDGGRVI KALVFSYRNY WALLILLTLS AGCAVLSAMF GFYFLVFFIV LGVIDTLSGW RVGLEQDVTP LTPYGILFSL GWYFLVVGLF LAMIVLIALD GLPGAEIATK VLSS
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