Gene Sde_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3312 
Symbol 
ID3965823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4224564 
End bp4225658 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content45% 
IMG OID637922409 
Productgamma-glutamyl phosphate reductase GPR 
Protein accessionYP_528779 
Protein GI90022952 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00700873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTGTT GTGTCATCGA TGTATCTGGT CAAGAGTTTA TCCTGTATTT TAATGACGAT 
ATGGCACTGT GCGATGTGCG TGCAAACGGC ATTACTTGTG CAATATCTCA AGATGCGACG
AGCGGCGAAA TAAGTGTGCA CCTTAACGAG CACGGTGTAA TTAAGCTTGT GCTGCAAGCT
GTTGTAGGTG ATGAAACTGC CGTGGGCTAT CGTGCTTATT TGAGCGATGC GTTTGTGGGT
CAGGGGGCGG CCAGCTTGCA AGACGTTGAC GCTTCCATGT TGCAAGCGCA GGTATTAGCT
GCGCCGCAAT CAACAGGTGT AGCTACGTCG CGATCACAAG GTAAGTGGTT AGCTATTGCC
GGCATTGGTT TTAAGCTGCT TAAAACGGTA AAGGTTGTAA AGGTGGCTTT GTTAGCTGCA
TCTGTTGGGG TGTACAGCGT AATCTTCACG CCTCAATTTG CTGTGGCATT GGTGGCCATT
CTTATGTTCC ATGAATATGG CCATATTCGC GGTATGAAAA AGTTTGGCAT ACCCACCAAA
GGTATTTATT TAATTCCGTT TTTTGGTGGT ATGGCGATTG GCGAAAAGCA CAAGTCTCAA
TGGCAAGATG TTTATATCTC TATGATGGGC CCTGTATATG GTTTAATTAT GACAGTGGTC
TTTTACCTTA TTTACTCGTT TACAGGCAGC CACTTCGCCG GTTTAGTCGC CTCTATTAGC
GCGCTATTAA ACCTGTTTAA TTTGCTGCCG GTGCACCCGC TAGATGGTGG TCGAGTAATT
AAAGCGCTTG TTTTCTCGTA CAGAAATTAT TGGGCACTGT TAATATTGCT TACCCTTTCT
GCCGGCTGTG CAGTATTAAG TGCAATGTTT GGGTTTTATT TTTTGGTGTT TTTTATTGTG
TTGGGCGTTA TAGATACCTT GTCCGGTTGG CGAGTCGGGT TGGAGCAAGA TGTAACCCCG
CTTACCCCTT ACGGTATTTT GTTTAGTTTG GGGTGGTACT TTTTAGTGGT GGGTTTATTT
TTGGCTATGA TTGTTTTAAT TGCTCTAGAT GGTTTACCCG GGGCCGAAAT TGCTACAAAA
GTGTTGTCAT CGTAA
 
Protein sequence
MKCCVIDVSG QEFILYFNDD MALCDVRANG ITCAISQDAT SGEISVHLNE HGVIKLVLQA 
VVGDETAVGY RAYLSDAFVG QGAASLQDVD ASMLQAQVLA APQSTGVATS RSQGKWLAIA
GIGFKLLKTV KVVKVALLAA SVGVYSVIFT PQFAVALVAI LMFHEYGHIR GMKKFGIPTK
GIYLIPFFGG MAIGEKHKSQ WQDVYISMMG PVYGLIMTVV FYLIYSFTGS HFAGLVASIS
ALLNLFNLLP VHPLDGGRVI KALVFSYRNY WALLILLTLS AGCAVLSAMF GFYFLVFFIV
LGVIDTLSGW RVGLEQDVTP LTPYGILFSL GWYFLVVGLF LAMIVLIALD GLPGAEIATK
VLSS