| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3311 |
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| Symbol | |
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| ID | 3965822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4223027 |
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| End bp | 4224232 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922408 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_528778 |
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| Protein GI | 90022951 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00665942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGCAA GGTTACACGT ATTAATCGTA GATGACGCGG TTGATATTTG TCAGTCGCTC
GAAATGCAGT TGTTGGACTA CGGTGTGTTC AAGGCAAGCT GGTGCTTAAG TGGTGAGGAA
GCGCTAGCGC TAATAGAGAA ACAACCAGCA AAGTACGATG CAATCTTTAT AGACTTACAT
ATGCCAGGAA TGGACGGTTT GGAGTTGATG CACCGTCTGA GTGAAATGCA GTACGCAGGT
GGCGTTGTTA TTATTTCTGC CCTTGGTGCG CGCGCTATCA ATCTTACTCT CGAAGCAGTT
TCTAATTATC ACCTACGTCT ACTCGGTTCA TTAGAAAAGC CTTTTGATGA ATCGCTCGTC
GCCTTTATGG TGCGACGCAT AAAAAATTCA ATGCCCAATG TGTCTTCTCA GGTTCCTTTG
TTGCGCAGAA AAGATGTGCT TGAGGCGCTG CGCGCTCGTC AAATGGTTAA TTATTATCAA
CCGCAAGTTA GCTCTATTGA TAACCGAGTG GTTGGCTTTG AGTGCTTGGC GCGATTAAAT
TTAAATGGCG AGGGCTTAAT CGGTGCGAAC CGTTTTATTG CGGTGGCCGA ACGATTCCAG
TTAATGGATT TAATTCTCGA CTGCCAAATG GAGAATCTCG GTCAAGATTT GGCAAACCTC
AAAGACTTGG TTGGCAATGA CTGTCGCTTT TCTATTAACT TGTCTGCTCA ACAGCTATAC
AACGATACGC TGCCAGAGTA CTTAGCCGAT TTGGCGGAAA ACTATGCTGT TCCACTCGAT
TGCCTACGAT TAGAAGTGCC AGAAAACCAG GCGATAATGG AAGATAAGCA GCTTAAAAAT
ATTCACCGTT TAAGCATTAA TGGTTTTAAT TTATCGCTTG ATAATTACGG GCAGGGCTAC
GCTAACCTCA GGCAAATTAC GCGCATGCCG TTTAGCGCGG TGAAGTTGAA TGCCCAAATG
ACTGAGGGTA TTCACAACGA TAAAATTATG CGCCTTATAG TTGAATCTAT TCGGCTGCAA
ACTCAAATAG CGGGCATTGA ATTGGTGGCG CTGGGTGTAG TGCAGCCAGA AGATTTACTG
GCATTAGCAG ATATAAATGT AGATGCGTAT CAAGGGCGTT TATTTTGCCC TAGTAAATCT
GCAGAAGAGT TGCAGGCGTG GGTGCCCAGC TGGTACGAAT CGCAAACCAT TAGGCCTTGG
TGCTAG
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| Protein sequence | MDARLHVLIV DDAVDICQSL EMQLLDYGVF KASWCLSGEE ALALIEKQPA KYDAIFIDLH
MPGMDGLELM HRLSEMQYAG GVVIISALGA RAINLTLEAV SNYHLRLLGS LEKPFDESLV
AFMVRRIKNS MPNVSSQVPL LRRKDVLEAL RARQMVNYYQ PQVSSIDNRV VGFECLARLN
LNGEGLIGAN RFIAVAERFQ LMDLILDCQM ENLGQDLANL KDLVGNDCRF SINLSAQQLY
NDTLPEYLAD LAENYAVPLD CLRLEVPENQ AIMEDKQLKN IHRLSINGFN LSLDNYGQGY
ANLRQITRMP FSAVKLNAQM TEGIHNDKIM RLIVESIRLQ TQIAGIELVA LGVVQPEDLL
ALADINVDAY QGRLFCPSKS AEELQAWVPS WYESQTIRPW C
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