Gene Sde_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3307 
Symbol 
ID3965818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4218144 
End bp4218611 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content50% 
IMG OID637922404 
Productrod shape-determining protein RodA 
Protein accessionYP_528774 
Protein GI90022947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.460384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.047628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCCA ATTTACGTAA TACACTTCTA AAATGCACCG CCGCCGTGCT TTTGTGCACC 
ACATATGGGC AAGCAATAGC CCTAGAGCCT AGTAAAGCCG CCACCAATGC TGAAGTATTT
TTTATTGAGC CCAAGAACGG CGCAGAGATA ACAGGCCCGG TCACCATTAA GTTCGGCATT
AAAAACATGA CGGTTATCCC AGCTGGCGTA CAGCACCCTT ACTCCGGCCA CCACCATTTG
CTTATCGACG TAGACAAGCT ACCAGACCTT AAAAGCCCCA TTCCCGCAGA CGCTAATCAC
CGTCACTTTG GCAAAGGCCA AACCGAAGCA ACACTCGAGC TTGAGCCAGG TGAGCACACG
TTACAATTGC TGCTTGGCGA TCATTTCCAC ATCCCGCACG ACAAGCCCGT GCTATCGGAA
AAAATCACCA TTACAGTAAA AGCAAAGCCC GCCGCAGCGG CAAAATAA
 
Protein sequence
MLSNLRNTLL KCTAAVLLCT TYGQAIALEP SKAATNAEVF FIEPKNGAEI TGPVTIKFGI 
KNMTVIPAGV QHPYSGHHHL LIDVDKLPDL KSPIPADANH RHFGKGQTEA TLELEPGEHT
LQLLLGDHFH IPHDKPVLSE KITITVKAKP AAAAK