| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3286 |
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| Symbol | |
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| ID | 3965778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4198361 |
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| End bp | 4199392 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922383 |
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| Product | Poly(beta-D-mannuronate) lyase |
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| Protein accession | YP_528753 |
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| Protein GI | 90022926 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00739048 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.539484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACC CAGCCCAACA CCTAGTGCGC CGCGGTATTT GCTCTTTAAC AACAGGCTTA
ATTATTAGCC TAGTCACTAT TTCTGGGTGC GGAGTGAAAA CAGAGAAAAT TGGCACCCAA
ACTTCCAATA AACCACTAAC GATTAGCGCC GATTCAGCAA ACACCCCGAT CACATCCCGT
GGAATCGGGC CTGCACTCAC ACACGCAACT CTCGACCCAC AAAAACCACC CGCTATAAAC
TTTGCGTTAA CAAATTGGAA GATCACTTTG CCAGACGCCA CCGAATACCT ACCTGATTGG
TTAACAGCGG GCAACGAAGT GGCCAACACC TTTTACACAT CCCCTCAAAC CGGCGCCATG
GTGTTTAATT GCCCAACACA CGGCAGCACC ACCAGCAGCG CGACAAAATA TTCACGTACA
GAATTAAGGG AAATGTTACG AGGGCTGAAT ACACGCCCTT CAACCAAGGG TATAGGGCGG
AACAATTGGG TGCTATCAAC CGCTCCACAC CAAAACCAAG TCAGTGCAGG CGGCATCGAT
GGCACCTTAG AAGCAGTTCT GAGCGTTGAT TACGTATCCC AAACTGGGCC AGCGCATATG
ATAGGCCGCG TGATAGTGGG GCAAATTCAC GGTGAAGATG ACGAGCCTGT GCGAATTTAT
TACCGCAAAC TGCCGCACAA CACCAAAGGC TCGGTGTATT TTGCAAGCGA GCACCCCGGC
GGCGAAGATG TGTTCTATCC AATGATAGGC AGTAGTAGCA ATAGCGCGGC CGACCCAGAA
GATGGTATAG CGCTAGGCGA AAAGTGGGGG TATCGCATTC ATATAGAAGG CAGGCAGCTT
AGTGTAAGAA TTATTCGCGA AGACGGGCGC TATGTGGAGC AATCACTCAC TATCGGCGAA
GCGTACAATA ACGATTGGTT TTACTTTAAA GCGGGGGTAT ATAACCAAAA TAATGATGGC
AACCCAGATG AATATGCCCA AGCCTCTTTT TTTAAACTTA AAGCAACACA TAAACAGTAT
AATAAACAAT AA
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| Protein sequence | MSHPAQHLVR RGICSLTTGL IISLVTISGC GVKTEKIGTQ TSNKPLTISA DSANTPITSR
GIGPALTHAT LDPQKPPAIN FALTNWKITL PDATEYLPDW LTAGNEVANT FYTSPQTGAM
VFNCPTHGST TSSATKYSRT ELREMLRGLN TRPSTKGIGR NNWVLSTAPH QNQVSAGGID
GTLEAVLSVD YVSQTGPAHM IGRVIVGQIH GEDDEPVRIY YRKLPHNTKG SVYFASEHPG
GEDVFYPMIG SSSNSAADPE DGIALGEKWG YRIHIEGRQL SVRIIREDGR YVEQSLTIGE
AYNNDWFYFK AGVYNQNNDG NPDEYAQASF FKLKATHKQY NKQ
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