| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3283 |
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| Symbol | |
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| ID | 3965775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4192857 |
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| End bp | 4193201 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637922380 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_528750 |
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| Protein GI | 90022923 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.218569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.219448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTAA CCGAAAGTGC AAATTTTCTA TTTTCCAAAG AAATAGAACC GGAAACAGTC
GGTGAAGGGA TAACTCGCCA AATACTAGGT TTTAATGAAC AAATTATGAT GGTGCGCGTT
ACGTTTGAGG CAGGAGCCGA AGGCTATGTG CACGAACACT TTCATTCGCA GGCTACCTAT
GTAGAAAGCG GTGAATTCGA AGTGAATGTG GGTGGTGAGA TCAAAACCTT AACAGCAGGT
GACGGTTTTT ATATTGCTCC CAATATTAGC CACGGCGCGG TTTGTAAAAA AGCAGGCGTA
CTCGTTGATG TATTTAGTCC GGTTCGGGCT GACTTTTTAA AGTAG
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| Protein sequence | MMLTESANFL FSKEIEPETV GEGITRQILG FNEQIMMVRV TFEAGAEGYV HEHFHSQATY
VESGEFEVNV GGEIKTLTAG DGFYIAPNIS HGAVCKKAGV LVDVFSPVRA DFLK
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