| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3238 |
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| Symbol | |
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| ID | 3965711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4128320 |
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| End bp | 4130278 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922335 |
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| Product | hypothetical protein |
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| Protein accession | YP_528707 |
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| Protein GI | 90022880 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000359216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.364609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACC TATCAACCAA GCGTTTACTG CCATTAGCAG CGCTCGCAAG TGCAATTTCT
TTCCATACGC ACGCTGCAGA CTTACACGTA TATAGCGGCG AAGATTTACA AGCAGCCATT
CAAGCTGCAC GAGCCGGCGA CGAAATTATC CTCCACCCAG GCGGTTACGA AAGTGTGGCC
ACATCCACCC TTAGCGGCTT TTCCGATGCG CATTACTACG GCGCCGCAGA CGGTACCGCA
AGCCAACCCA TTATTTTGCG CAGCCAGTCG GCCTCGAACA AACAAGTACT AACCGGTGCA
ACCCCAGATA AAAAAATTGG TTTATACATC ACCGGCGATT ACTGGATTAT CAAAGATATT
GTTGTAACAA ACTCTAAGCG CGGCATTGTG TTAGATAACT CTAACCACTC CATTATTGAT
AACGTGGTTG TACACAACAT AGGGCAAGAA GGTATTCACC TGCGCGATAA CAGCTCGTAC
AACATTGTTA AAAACTCTTG GGTTTACAAC ACAGGCGTTA CCAGCGCGGG CACGGGCGAA
GGCTTTTACG TTGGCTCGCA CCCTGGCAGC GATAACGGCA AAGGCTATGT GTACGGCGCG
GCATGTAATT ACAACGTAAT CGGCGGCAAC ACCATTGGGC CAAACGTACG TGCAGAGCAT
ATAGACATAA AAGAAGGCAC CAAAGGCACC ATATTCGAAT ACAACATTAT GGATGGAACG
GGTATTTCTG GTGCAAACTC GGCAGACAGC TTTGTAGACA TTAAAGGCCA AGACGCGGTT
ATTCGTGGCA ACAAAGCCTA CAGAAACGGC GAAGCAAAAG TTAAAAACGC ATTCGAAACT
CACAGCGATG CCGACAACAA CACGTTTATT GCAAACGAAG TGGACCTAGA CGGTAGCAGC
GATTACTTAC TGTTTGCTTC AGAAGGCGTA AACCACGTTT CTAGCGATAA CATACGTTTA
GATGGTCGCA GCGATCGTAT TGCCGGCCAT TGGTCCGCTG CAAGTGTCGA TTCGAATATC
CCTAGCGGTA TTCCTGCACC GGGCAACTAC AGCACTAGCT CCGGTTCGTC TTCCAGCTCA
TCGTCTAGTT CTTCTAGTTC GTCTTCAAGT TCATCCTCTA GCTCTTCAGG CTCCAGCTCT
GGCGGCGTAA ATTTACCCGC AAAAATTGAA GCAGAAAATT ACGATAGCGC ACCGGTAGAA
AGCACAAGCG GCAACGCAAA CAGCGGCAGC GTAACCAACT GCACCTACCG AGGCCTAAAT
GTAGATGTGC AAAACGCCAC AGAAAGCGGC TGCAATATTG GCTGGACAAC AGCCGGTGAA
GAAGTCACTT ACAACATTGG CAGCGCCAAC GCCAACTACA ATGTTGCTCT GCGAATCGCT
TCCAACTATT CCGGTAAGCG CTTAGCACTA TACGTTAACA ATACACACGC TGGCACAGTC
ACAACCAGTG GCAGCGGTTG GCAGGCATGG GAAACCAAAA CGCTTTCTAA CGTTTATATT
CCATCTAACA GTGTTTTAAC GGTTAAGTTT TTAGATGGCA GCACCAACTT TAATTACTTA
AACATAACAA CAGGCGGCAG CTCCTCTTCT AGCTCCAGCT CTAGCTCAAG TTCATCGTCA
AGCTCGTCTT CAAGCTCGTC ATCTAGCTCT AGCTCCTCCG GCGGCGGCGC ATGCTCAAGT
TATGTAGACA TTCCTTGGGA TGAGCGAACA GAGGTCACAC TGGGCAATGG TGTATGTGTA
CGCACAGCAC AAAATCTTGC TGGCAAAACC TTGCAACTAT GGGATAGCGA TACCAATAGC
TCGTGCGACT TCCGTGGCAC CGTTGTATCT ACAGATGGCA CCGGCAGTGT TAGCGTTAGT
AGTAACTACG TATCCACAAC AAATTTAACT GGCACCAAGC TTAATTTTGT ACCCGCCAGC
GGAACCAGTT GCCAATATGT AAAAGTACGT TCGTATTAA
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| Protein sequence | MRNLSTKRLL PLAALASAIS FHTHAADLHV YSGEDLQAAI QAARAGDEII LHPGGYESVA
TSTLSGFSDA HYYGAADGTA SQPIILRSQS ASNKQVLTGA TPDKKIGLYI TGDYWIIKDI
VVTNSKRGIV LDNSNHSIID NVVVHNIGQE GIHLRDNSSY NIVKNSWVYN TGVTSAGTGE
GFYVGSHPGS DNGKGYVYGA ACNYNVIGGN TIGPNVRAEH IDIKEGTKGT IFEYNIMDGT
GISGANSADS FVDIKGQDAV IRGNKAYRNG EAKVKNAFET HSDADNNTFI ANEVDLDGSS
DYLLFASEGV NHVSSDNIRL DGRSDRIAGH WSAASVDSNI PSGIPAPGNY STSSGSSSSS
SSSSSSSSSS SSSSSSGSSS GGVNLPAKIE AENYDSAPVE STSGNANSGS VTNCTYRGLN
VDVQNATESG CNIGWTTAGE EVTYNIGSAN ANYNVALRIA SNYSGKRLAL YVNNTHAGTV
TTSGSGWQAW ETKTLSNVYI PSNSVLTVKF LDGSTNFNYL NITTGGSSSS SSSSSSSSSS
SSSSSSSSSS SSSGGGACSS YVDIPWDERT EVTLGNGVCV RTAQNLAGKT LQLWDSDTNS
SCDFRGTVVS TDGTGSVSVS SNYVSTTNLT GTKLNFVPAS GTSCQYVKVR SY
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